Evidence map›Paper›PMID 29915236›Full record

ArticleNature chemical biology2018

Single-molecule probing of the conformational homogeneity of the ABC transporter BtuCD.

Min Yang, Nurit Livnat Levanon, Burçin Acar, Burcu Aykac Fas, Gal Masrati, Jessica Rose, Nir Ben-Tal, Turkan Haliloglu, Yongfang Zhao, Oded Lewinson

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Article in Nature chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. The Evolution of ABC Importers.Journal of molecular biology · 2025
    Review
  2. Article
  3. Article
  4. Article
  5. Article
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  7. Article
  8. Article
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  10. Linking function to global and local dynamics in an elevator-type transporter.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Structural dynamics in the evolution of a bilobed protein scaffold.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  12. Article
  13. Single-Molecule FRET of Membrane Transport Proteins.Chembiochem : a European journal of chemical biology · 2021
    Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Single-molecule FRET methods to study the dynamics of proteins at work.Current opinion in biomedical engineering · 2019
    Article
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

10 authors.

Min YangNational Laboratory of Macromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0003-4792-9493
Nurit Livnat LevanonDepartment of Biochemistry and the Rappaport Institute for Medical Sciences, Faculty of Medicine, The Technion-Israel Institute of Technology, Haifa, Israel.
Burçin AcarDepartment of Chemical Engineering and Polymer Research Center, Bogazici University, Istanbul, Turkey.ORCID http://orcid.org/0000-0001-5912-5105
Burcu Aykac FasDepartment of Chemical Engineering and Polymer Research Center, Bogazici University, Istanbul, Turkey.ORCID http://orcid.org/0000-0003-3842-731X
Gal MasratiDepartment of Biochemistry and Molecular Biology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel.
Jessica RoseDepartment of Biochemistry and the Rappaport Institute for Medical Sciences, Faculty of Medicine, The Technion-Israel Institute of Technology, Haifa, Israel.
Nir Ben-TalDepartment of Biochemistry and Molecular Biology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel. bental@tauex.tau.ac.il.ORCID http://orcid.org/0000-0001-6901-832X
Turkan HalilogluDepartment of Chemical Engineering and Polymer Research Center, Bogazici University, Istanbul, Turkey. halilogt@boun.edu.tr.ORCID http://orcid.org/0000-0002-1279-5803
Yongfang ZhaoNational Laboratory of Macromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
Oded LewinsonDepartment of Biochemistry and the Rappaport Institute for Medical Sciences, Faculty of Medicine, The Technion-Israel Institute of Technology, Haifa, Israel. lewinson@technion.ac.il.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ATP-binding cassette (ABC) transporters use the energy of ATP hydrolysis to move molecules through cellular membranes. They are directly linked to human diseases, cancer multidrug resistance, and bacterial virulence. Very little is known of the conformational dynamics of ABC transporters, especially at the single-molecule level. Here, we combine single-molecule spectroscopy and a novel molecular simulation approach to investigate the conformational dynamics of the ABC transporter BtuCD. We observe a single dominant population of molecules in each step of the transport cycle and tight coupling between conformational transitions and ligand binding. We uncover transient conformational changes that allow substrate to enter the transporter. This is followed by a 'squeezing' motion propagating from the extracellular to the intracellular side of the translocation cavity. This coordinated sequence of events provides a mechanism for the unidirectional transport of vitamin B

Indexed as

ATP-Binding Cassette TransportersCysteineEscherichia coli ProteinsFluorescence Resonance Energy TransferModels, MolecularProtein ConformationATP-Binding Cassette TransportersBtuD peptide, E coliCysteineEscherichia coli Proteins

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.