ArticleScientific reports2018
Ruminant and chicken: important sources of campylobacteriosis in France despite a variation of source attribution in 2009 and 2015.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
33 citing papers in PubMed, 1 synthesis or guideline pooled it.
- A statistical modelling approach for source attribution meta-analysis of sporadic infection with foodborne pathogens.Zoonoses and public health · 2022Pooled it
- Comparison of culture-based methods for detectingMicrobiology spectrum · 2025Article
- Risk factors for fluoroquinolone- and macrolide-resistance among swine Campylobacter coli using multi-layered chain graphs.PLoS computational biology · 2025Article
- Source attribution of humanFrontiers in microbiology · 2025Article
- Detection ofVeterinary world · 2024Article
- Evidence of potentialMicrobial genomics · 2023Article
- Transforming Shiga toxin-producingFrontiers in microbiology · 2023Article
- Molecular Epidemiological Evidence Implicates Cattle as a Primary Reservoir ofPathogens (Basel, Switzerland) · 2022Article
- Influence of Single Dose Enrofloxacin Injection on Development of Fluoroquinolone Resistance inAntibiotics (Basel, Switzerland) · 2022Article
- Prevalence, species diversity, and antimicrobial susceptibility ofIranian journal of microbiology · 2022Article
- Local accessory gene sharing among EgyptianMicrobial genomics · 2022Article
- Quantitative detection and genetic characterization of thermotolerantFrontiers in microbiology · 2022Article
- Phylogenetic Analysis Reveals Source Attribution Patterns forMicroorganisms · 2021Article
- Article
- Emergence of Erythromycin Resistance Methyltransferases in Campylobacter coli Strains in France.Antimicrobial agents and chemotherapy · 2021Article
- Machine learning to predict the source of campylobacteriosis using whole genome data.PLoS genetics · 2021Article
- Occurrence of Campylobacter spp. in Swedish calves, common sequence types and antibiotic resistance patterns.Journal of applied microbiology · 2021Article
- Characterization ofFrontiers in microbiology · 2021Article
- Monitoring of Antimicrobial Resistance to Aminoglycosides and Macrolides inFrontiers in microbiology · 2021Article
- Genome-Wide Identification of Host-Segregating Single-Nucleotide Polymorphisms for Source Attribution of Clinical Campylobacter coli Isolates.Applied and environmental microbiology · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
13 authors.
Funding
Abstract
Pathogen source attribution studies are a useful tool for identifying reservoirs of human infection. Based on Multilocus Sequence Typing (MLST) data, such studies have identified chicken as a major source of C. jejuni human infection. The use of whole genome sequence-based typing methods offers potential to improve the precision of attribution beyond that which is possible from 7 MLST loci. Using published data and 156 novel C. jejuni genomes sequenced in this study, we performed probabilistic host source attribution of clinical C. jejuni isolates from France using three types of genotype data: comparative genomic fingerprints; MLST genes; 15 host segregating genes previously identified by whole genome sequencing. Consistent with previous studies, chicken was an important source of campylobacteriosis in France (31-63% of clinical isolates assigned). There was also evidence that ruminants are a source (22-55% of clinical isolates assigned), suggesting that further investigation of potential transmission routes from ruminants to human would be useful. Additionally, we found evidence of environmental and pet sources. However, the relative importance as sources varied according to the year of isolation and the genotyping technique used. Annual variations in attribution emphasize the dynamic nature of zoonotic transmission and the need to perform source attribution regularly.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.