Evidence map›Paper›PMID 29915149›Full record

ArticleMolecular & cellular proteomics : MCP2018

Glycomic and Proteomic Changes in Aging Brain Nigrostriatal Pathway.

Rekha Raghunathan, Nicole K Polinski, Joshua A Klein, John D Hogan, Chun Shao, Kshitij Khatri, Deborah Leon, Mark E McComb, Fredric P Manfredsson, Caryl E Sortwell and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. The dynamic brain N-glycome.Glycoconjugate journal · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Glycomic profiling and the mammalian brain.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Article
  16. Glycosylation and Aging.Advances in experimental medicine and biology · 2021
    Article
  17. Article
  18. Review
  19. Article
  20. Proteomics, Glycomics, and Glycoproteomics of Matrisome Molecules.Molecular & cellular proteomics : MCP · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Rekha RaghunathanFrom the ‡Department of Molecular and Translational Medicine, Center for Biomedical Mass Spectrometry, Boston University Medical Campus, Boston, Massachusetts.
Nicole K Polinski‖Department of Translational Science and Molecular Medicine, Michigan State University.
Joshua A Klein¶Bioinformatics Program, Boston University, Boston, Massachusetts.
John D Hogan¶Bioinformatics Program, Boston University, Boston, Massachusetts.
Chun Shao§Department of Biochemistry, Center for Biomedical Mass Spectrometry, Boston University Medical Campus, Boston, Massachusetts.
Kshitij Khatri§Department of Biochemistry, Center for Biomedical Mass Spectrometry, Boston University Medical Campus, Boston, Massachusetts.ORCID 0000-0002-6592-869X
Deborah Leon§Department of Biochemistry, Center for Biomedical Mass Spectrometry, Boston University Medical Campus, Boston, Massachusetts.
Mark E McComb§Department of Biochemistry, Center for Biomedical Mass Spectrometry, Boston University Medical Campus, Boston, Massachusetts.
Fredric P Manfredsson‖Department of Translational Science and Molecular Medicine, Michigan State University.ORCID 0000-0001-5802-5487
Caryl E Sortwell‖Department of Translational Science and Molecular Medicine, Michigan State University.
Joseph ZaiaFrom the ‡Department of Molecular and Translational Medicine, Center for Biomedical Mass Spectrometry, Boston University Medical Campus, Boston, Massachusetts; jzaia@bu.edu.ORCID 0000-0001-9497-8701
Boston University · USMichigan Center for Translational Pathology · US

Funding

Mass Spectrometry Resource for Biology and MedicineP41GM104603 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI COSTELLO, CATHERINE E. · 2012 to 2017
$10.4M
Legacy Support During Closure of the Mass Spectrometry Resource for Biology and MedicineR24GM134210 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI COSTELLO, CATHERINE E. · 2019 to 2021
$2.1M
An open-source software suite for processing glycomics and glycoproteomics mass spectral dataU01CA221234 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ZAIA, JOSEPH · 2017 to 2019
$1.2M
Quantitative profiling of glycosaminoglycans from breast tumor tissue arraysR21CA177479 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ZAIA, JOSEPH · 2014 to 2016
$712k
A Thermo-Fisher Scientific Q-Exactive HF Mass Spectrometry SystemS10OD021651 · OD · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ZAIA, JOSEPH · 2016 to 2016
$580k
Viral Vector Transduction Deficiencies in the Aged Nigrostriatal SystemR56AG052328 · NIA · MICHIGAN STATE UNIVERSITY · PI MANFREDSSON, FREDRIC, SORTWELL, CARYL E · 2016 to 2016
$578k
NCI NIH HHS R21 CA177479NCI NIH HHS U01 CA221234NIA NIH HHS R56 AG052328NIGMS NIH HHS P41 GM104603NIGMS NIH HHS R24 GM134210NIH HHS S10 OD021651
6 · The paper itself

Abstract

Parkinson's disease (PD) is a neurological disorder characterized by the progressive loss of functional dopaminergic neurons in the nigrostriatal pathway in the brain. Although current treatments provide only symptomatic relief, gene therapy has the potential to slow or halt the degeneration of nigrostriatal dopamine neurons in PD patients. Adeno-associated viruses (AAV) are vectors of choice in gene therapy because of their well-characterized safety and efficacy profiles; however, although gene therapy has been successful in preclinical models of the disease, clinical trials in humans have failed to demonstrate efficacy. Significantly, all primary AAV receptors of the virus are glycans. We thus hypothesize that age related changes in glycan receptors of heparan sulfate (HS) proteoglycans (receptor for rAAV2), and/or

Indexed as

GlycomicsProteomicsAgingAnimalsCorpus StriatumDisaccharidesGalactoseHeparan SulfateMaleOrgan SpecificityPolysaccharidesProteomeRats, Inbred F344Substantia NigraDisaccharidesGalactoseHeparan SulfatePolysaccharidesProteome

Identifiers

PMID29915149
PMCPMC6126385
OpenAlexW2809376065

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.