Evidence map›Paper›PMID 29915071›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

Structure of a lipid-bound viral membrane assembly protein reveals a modality for enclosing the lipid bilayer.

Prabhat Kumar Pathak, Shuxia Peng, Xiangzhi Meng, Yue Han, Bing Zhang, Fushun Zhang, Yan Xiang, Junpeng Deng

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Assembly and Evolution of Poxviruses.Advances in experimental medicine and biology · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. The mosquito protein AEG12 displays both cytolytic and antiviral properties via a common lipid transfer mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Prabhat Kumar PathakDepartment of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK 74078.
Shuxia PengDepartment of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK 74078.
Xiangzhi MengDepartment of Microbiology, Immunology, and Molecular Genetics, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229.
Yue HanDepartment of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK 74078.
Bing ZhangDepartment of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK 74078.
Fushun ZhangDepartment of Microbiology, Immunology, and Molecular Genetics, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229.
Yan XiangDepartment of Microbiology, Immunology, and Molecular Genetics, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229 xiangy@uthscsa.edu junpeng.deng@okstate.edu.ORCID 0000-0002-7633-1629
Junpeng DengDepartment of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, OK 74078; xiangy@uthscsa.edu junpeng.deng@okstate.edu.
Oklahoma State University · USThe University of Texas Health Science Center at San Antonio · US

Funding

Poxvirus Immune Evasion MechanismsR01AI079217 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI XIANG, YAN · 2008 to 2018
$3.3M
Non-vesicular lipid transport by poxvirus A6 proteinR21AI133589 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI DENG, JUNPENG, XIANG, YAN · 2017 to 2018
$418k
NIAID NIH HHS R01 AI079217NIAID NIH HHS R21 AI133589
6 · The paper itself

Abstract

Cellular membranes are maintained as closed compartments, broken up only transiently during membrane reorganization or lipid transportation. However, open-ended membranes, likely derived from scissions of the endoplasmic reticulum, persist in vaccinia virus-infected cells during the assembly of the viral envelope. A group of viral membrane assembly proteins (VMAPs) were identified as essential for this process. To understand the mechanism of VMAPs, we determined the 2.2-Å crystal structure of the largest member, named A6, which is a soluble protein with two distinct domains. The structure of A6 displays a novel protein fold composed mainly of alpha helices. The larger C-terminal domain forms a unique cage that encloses multiple glycerophospholipids with a lipid bilayer-like configuration. The smaller N-terminal domain does not bind lipid but negatively affects lipid binding by A6. Mutations of key hydrophobic residues lining the lipid-binding cage disrupt lipid binding and abolish viral replication. Our results reveal a protein modality for enclosing the lipid bilayer and provide molecular insight into a viral machinery involved in generating and/or stabilizing open-ended membranes.

Indexed as

Crystallography, X-RayLipid BilayersMembrane ProteinsVaccinia virusViral ProteinsLipid BilayersMembrane ProteinsViral Proteinscrescent membranecrystal structurenonvesicular transfervaccinia A6VMAP

Identifiers

PMID29915071
PMCPMC6142198
OpenAlexW2808983248

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.