Evidence map›Paper›PMID 29912989›Full record

ArticlePloS one2018

Respiratory virus of severe pneumonia in South Korea: Prevalence and clinical implications.

Hyung-Jun Kim, Sun Mi Choi, Jinwoo Lee, Young Sik Park, Chang-Hoon Lee, Jae-Joon Yim, Chul-Gyu Yoo, Young Whan Kim, Sung Koo Han, Sang-Min Lee

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Comparison of clinical characteristics and outcomes between respiratory syncytial virus and influenza-related pneumonia in China from 2013 to 2019.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2021
    Article
  8. Thrombocytopenia in Virus Infections.Journal of clinical medicine · 2021
    Review
  9. Increased Detection of Viruses in Children with Respiratory Tract Infection Using PCR.International journal of environmental research and public health · 2020
    Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Hyung-Jun KimDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Sun Mi ChoiDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Jinwoo LeeDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Young Sik ParkDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Chang-Hoon LeeDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Jae-Joon YimDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Chul-Gyu YooDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Young Whan KimDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Sung Koo HanDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
Sang-Min LeeDepartment of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.ORCID 0000-0002-1388-9318
Seoul National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSevere viral pneumonia is associated with a high mortality rate. However, due to the vulnerability of critically ill patients, invasive diagnostic methods should be performed with caution in the intensive care unit (ICU). It would be helpful if the prevalence, risk factors, and clinical impact of virus detection are elucidated.

methodsWe evaluated patients with severe pneumonia between January 1st 2008 and December 31st 2015. Reverse transcription-polymerase chain reaction (RT-PCR) analysis was performed for 8 respiratory viruses when viral pathogen could not be excluded as the origin of severe pneumonia. The baseline characteristics, laboratory results, microbiological findings, and clinical outcomes of the patients were analyzed.

resultsOf the 2,347 patients admitted to the medical ICU, 515 underwent RT-PCR for respiratory viruses, 69 of whom had positive results. The detection rate was higher during the winter, with a community onset, in patients with history of recent chemotherapy, and low platelet count. Additional bronchoscopic sampling along with upper respiratory specimen increased the yield of viral detection. Respiratory syncytial virus was the most common pathogen detected, while influenza A was the most common virus with bacterial coinfection. Respiratory virus detection led to changes in clinical management in one-third of the patients.

conclusionsThe detection of viral pathogens in patients with severe pneumonia is not rare, and can be more common in certain group of patients. Invasive sampling for RT-PCR can be helpful, and such detection can lead to positive changes in clinical management.

Indexed as

Acute DiseaseAgedCoinfectionFemaleHumansInfluenza A virusInfluenza, HumanIntensive Care UnitsMaleMiddle AgedPneumonia, BacterialPneumonia, ViralPrevalenceRepublic of KoreaRespiratory Syncytial VirusesRespiratory Syncytial Virus Infections

Identifiers

PMID29912989
PMCPMC6005478
OpenAlexW2809399449

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.