Evidence map›Paper›PMID 29911385›Full record

ArticleNano letters2018

Programmable Multivalent DNA-Origami Tension Probes for Reporting Cellular Traction Forces.

Palash K Dutta, Yun Zhang, Aaron T Blanchard, Chenghao Ge, Muaz Rushdi, Kristin Weiss, Cheng Zhu, Yonggang Ke, Khalid Salaita

Abstract read
In one paragraph

Article in Nano letters, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

  1. Article
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  3. Article
  4. Article
  5. Article
  6. Mechanochemistry: Fundamental Principles and Applications.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Review
  7. Review
  8. DNA Origami Vesicle Sensors with Triggered Single-Molecule Cargo Transfer.Angewandte Chemie (International ed. in English) · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Synthetic living materials in cancer biology.Nature reviews bioengineering · 2023
    Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Palash K Dutta
Yun ZhangDepartment of Chemistry , Emory University , 1515 Dickey Drive , Atlanta , Georgia 30322 , United States.
Aaron T Blanchard
Chenghao Ge
Muaz Rushdi
Kristin Weiss
Cheng Zhu
Yonggang KeDepartment of Chemistry , Emory University , 1515 Dickey Drive , Atlanta , Georgia 30322 , United States.ORCID 0000-0003-1673-2153
Khalid SalaitaDepartment of Chemistry , Emory University , 1515 Dickey Drive , Atlanta , Georgia 30322 , United States.ORCID 0000-0003-4138-3477

Funding

Developing a Bioanalytical Toolkit to Study the Mechanobiology of Juxtacrine SignalingR01GM124472 · NIGMS · EMORY UNIVERSITY · PI SALAITA, KHALID S. · 2017 to 2020
$1.5M
DNA origami based molecular probes for quantitative study on TCR/CD8 binding with pMHCsR21AI135753 · NIAID · EMORY UNIVERSITY · PI KE, YONGGANG, ZHU, CHENG · 2018 to 2019
$428k
NIAID NIH HHS R21 AI135753NIGMS NIH HHS R01 GM124472
6 · The paper itself

Abstract

Mechanical forces are central to most, if not all, biological processes, including cell development, immune recognition, and metastasis. Because the cellular machinery mediating mechano-sensing and force generation is dependent on the nanoscale organization and geometry of protein assemblies, a current need in the field is the development of force-sensing probes that can be customized at the nanometer-length scale. In this work, we describe a DNA origami tension sensor that maps the piconewton (pN) forces generated by living cells. As a proof-of-concept, we engineered a novel library of six-helix-bundle DNA-origami tension probes (DOTPs) with a tailorable number of tension-reporting hairpins (each with their own tunable tension response threshold) and a tunable number of cell-receptor ligands. We used single-molecule force spectroscopy to determine the probes' tension response thresholds and used computational modeling to show that hairpin unfolding is semi-cooperative and orientation-dependent. Finally, we use our DOTP library to map the forces applied by human blood platelets during initial adhesion and activation. We find that the total tension signal exhibited by platelets on DOTP-functionalized surfaces increases with the number of ligands per DOTP, likely due to increased total ligand density, and decreases exponentially with the DOTP's force-response threshold. This work opens the door to applications for understanding and regulating biophysical processes involving cooperativity and multivalency.

Indexed as

Biosensing TechniquesBlood PlateletsCell AdhesionCell LineComputer SimulationDNADNA ProbesErythrocytesGene LibraryHumansLigandsMechanotransduction, CellularMonte Carlo MethodNanoparticlesNucleic Acid ConformationParticle SizeDNADNA ProbesLigandsStreptavidinbiomembrane force probecellular traction forcesDNA origamiplatelets

Identifiers

PMID29911385
PMCPMC6087633

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.