Evidence map›Paper›PMID 29908642›Full record

ArticlePlacenta2018

Defining the rhesus macaque placental miRNAome: Conservation of expression of placental miRNA clusters between the macaque and human.

Jenna Kropp Schmidt, Lindsey N Block, Thaddeus G Golos

Open access · greenAbstract read
In one paragraph

Article in Placenta, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. The Role of Placental Non-Coding RNAs in Adverse Pregnancy Outcomes.International journal of molecular sciences · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jenna Kropp SchmidtWisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, WI, 53715, USA. Electronic address: jkropp@wisc.edu.
Lindsey N BlockWisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, WI, 53715, USA; Department of Pathology and Laboratory Medicine, University of Wisconsin-Madison, Madison, WI, 53715, USA.
Thaddeus G GolosWisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, WI, 53715, USA; Department of Comparative Biosciences, University of Wisconsin-Madison, Madison, WI, 53715, USA; Department of Obstetrics and Gynecology, University of Wisconsin-Madison, Madison, WI, 53715, USA.
University of Wisconsin–Madison · US

Funding

WNPRC Supplemental Request for Nonhuman Primate Enclosures to Equip HIV/AIDS-Related Research FacilitiesP51OD011106 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI Dorota A. Grejner-Brzezinska · 2012 to 2026
$150.7M
Graduate Training In Cellular And Molecular Pathogenesis Of Human DiseasesT32GM081061 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FABRY, ZSUZSANNA · 2010 to 2019
$1.8M
Nonhuman Primate Model to Assess Embryonic Zika Virus InfectionR21HD091163 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI GOLOS, THADDEUS G · 2016 to 2017
$421k
NICHD NIH HHS R21 HD091163NIGMS NIH HHS T32 GM081061NIH HHS P51 OD011106
6 · The paper itself

Abstract

objectiveExpression of microRNAs (miRNAs) in the human placenta is dynamic across gestation, with expression of miRNAs belonging to the C14MC, C19MC and miR-371-3 clusters. Specifically, miRNAs within the C19MC cluster are exclusively expressed in primates with predominant expression in the placenta. Non-human primates can be utilized to study developmental processes of placentation in vivo that cannot be assessed in the human placenta, however, miRNA expression has not been defined in the macaque placenta. Our objective was to profile miRNAs in the macaque placenta, hypothesizing that expression is conserved between the macaque and human placenta.

methodsTotal RNA from first trimester and term macaque placentas (n = 4 per group) was analyzed through RNA-sequencing and validated by quantitative real-time PCR (qRT-PCR).

resultsA total of 607 pre-miRNAs previously annotated in the macaque reference database (miRBase21) were detected, and 166 miRNAs were differentially expressed between first trimester and term placentas. A total of 457 unannotated sequences were detected and deemed candidate novel miRNAs by miRDeep2 software. Differential expression was confirmed for six of nine miRNAs evaluated by qRT-PCR. Comparative analysis demonstrated expression of several miRNA orthologs of human pregnancy-associated miRNA clusters in the macaque placenta.

conclusionsProfiling placental miRNAs of the macaque revealed conserved expression of a number of miRNAs within the C14MC, C19MC and miR-371-3 clusters between the human and macaque. These results establish non-human primates as a model for human placentation and miRNA biology, with the prediction of their functional significance in placental development and function.

Indexed as

Pregnancy, AnimalAnimalsFemaleGene ExpressionGene Expression ProfilingHumansMacaca mulattaMicroRNAsMultigene FamilyPlacentaPlacentationPregnancyPregnancy Trimester, FirstPregnancy Trimester, ThirdSpecies SpecificityTranscriptomeMicroRNAsGene expressionMacaquemiRNAPlacenta

Identifiers

PMID29908642
PMCPMC6007866
OpenAlexW2752416901

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.