Evidence map›Paper›PMID 29905864›Full record

ArticleHuman molecular genetics2018

Pathogenic variant in EPHB4 results in central conducting lymphatic anomaly.

Dong Li, Tara L Wenger, Christoph Seiler, Michael E March, Alvaro Gutierrez-Uzquiza, Charlly Kao, Elizabeth Bhoj, Lifeng Tian, Misha Rosenbach, Yichuan Liu and 14 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 99 citations in OpenAlex.

  1. SHOC2 Is a Novel Cause of Central Conducting Lymphatic Anomaly.American journal of medical genetics. Part A · 2026
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  9. Molecular landscape and classification of vascular anomalies.Hematology. American Society of Hematology. Education Program · 2024
    Review
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  13. Central conducting lymphatic anomaly: from bench to bedside.The Journal of clinical investigation · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 4 institutions in 2 countries.

Dong LiCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Tara L WengerDivision of Craniofacial Medicine, Seattle Children's Hospital, Seattle, WA, USA.
Christoph SeilerZebrafish core, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Michael E MarchCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Alvaro Gutierrez-UzquizaCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Charlly KaoCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Elizabeth BhojCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Lifeng TianCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Misha RosenbachDepartment of Dermatology, University of Pennsylvania School of Medicine, Philadelphia, PA, USA.
Yichuan LiuCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Nora RobinsonCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Mechenzie BehrCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Rosetta ChiavacciCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Cuiping HouCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Tiancheng WangCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Marina BakayCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Renata Pellegrino da SilvaCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Jonathan A PerkinsDivision of Otolaryngology-Head and Neck Surgery, Seattle Children's Hospital, Seattle, WA, USA.
Patrick SleimanCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Michael A LevineDepartment of Pediatrics, University of Pennsylvania School of Medicine, Philadelphia, PA, USA.
Patricia J HicksDepartment of Pediatrics, University of Pennsylvania School of Medicine, Philadelphia, PA, USA.
Maxim ItkinCenter for Lymphatic Imaging and Interventions.
Yoav DoriCenter for Lymphatic Imaging and Interventions.
Hakon HakonarsonCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Children's Hospital of Philadelphia · USSeattle Children's Hospital · USUniversity of Pennsylvania · USDiabetes Australia · AU

Funding

Mosaic: post-zygotic mutations in vascular malformationsR01HL130996 · NHLBI · SEATTLE CHILDREN'S HOSPITAL · PI BENNETT, JAMES T · 2016 to 2024
$7.5M
NHLBI NIH HHS R01 HL130996
6 · The paper itself

Abstract

Central conducting lymphatic anomaly (CCLA) is one of the complex lymphatic anomalies characterized by dilated lymphatic channels, lymphatic channel dysmotility and distal obstruction affecting lymphatic drainage. We performed whole exome sequencing (WES) of DNA from a four-generation pedigree and examined the consequences of the variant by transfection of mammalian cells and morpholino and rescue studies in zebrafish. WES revealed a heterozygous mutation in EPHB4 (RefSeq NM_004444.4; c.2334 + 1G>C) and RNA-Seq demonstrated that the EPHB4 mutation destroys the normal donor site, which leads to the use of a cryptic splice donor that results in retention of the intervening 12-bp intron sequence. Transient co-expression of the wild-type and mutant EPHB4 proteins showed reduced phosphorylation of tyrosine, consistent with a loss-of-function effect. Zebrafish ephb4a morpholino resulted in vessel misbranching and deformities in the lymphatic vessel development, indicative of possible differentiation defects in lymphatic vessels, mimicking the lymphatic presentations of the patients. Immunoblot analysis using zebrafish lysates demonstrated over-activation of mTORC1 as a consequence of reduced EPHB4 signaling. Strikingly, drugs that inhibit mTOR signaling or RAS-MAPK signaling effectively rescued the misbranching phenotype in a comparable manner. Moreover, knock-in of EPHB4 mutation in HEK293T cells also induced mTORC1 activity. Our data demonstrate the pathogenicity of the identified EPHB4 mutation as a novel cause of CCLA and suggesting that ERK inhibitors may have therapeutic benefits in such patients with complex lymphatic anomalies.

Indexed as

Exome SequencingAnimalsDisease Models, AnimalHEK293 CellsHeterozygoteHumansLymphatic AbnormalitiesLymphatic VesselsMechanistic Target of Rapamycin Complex 1PedigreePhosphorylationReceptor, EphB4Receptor Protein-Tyrosine KinasesSignal TransductionZebrafishMechanistic Target of Rapamycin Complex 1Receptor, EphB4Receptor Protein-Tyrosine Kinases

Identifiers

PMID29905864
PMCPMC7190898
OpenAlexW2807785951

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.