Evidence map›Paper›PMID 29903866›Full record

ArticleGenetics2018

Multiple Nonsense-Mediated mRNA Processes Require

Jonathan O Nelson, Dominique Förster, Kimberly A Frizzell, Stefan Luschnig, Mark M Metzstein

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Jonathan O NelsonDepartment of Human Genetics, University of Utah, Salt Lake City, Utah 84112.ORCID 0000-0001-9831-745X
Dominique FörsterInstitute for Zoophysiology, Institute for Neuro- and Behavioural Biology and Cells-in-Motion Cluster of Excellence (EXC 1003 - 8 CiM), University of Münster, Schlossplatz 8, D-48149 Münster, Germany.ORCID 0000-0002-7821-6755
Kimberly A FrizzellDepartment of Human Genetics, University of Utah, Salt Lake City, Utah 84112.
Stefan LuschnigInstitute for Zoophysiology, Institute for Neuro- and Behavioural Biology and Cells-in-Motion Cluster of Excellence (EXC 1003 - 8 CiM), University of Münster, Schlossplatz 8, D-48149 Münster, Germany.ORCID 0000-0002-0634-3368
Mark M MetzsteinDepartment of Human Genetics, University of Utah, Salt Lake City, Utah 84112 markm@genetics.utah.edu.ORCID 0000-0002-4105-2750
University of Utah · USUniversity of Münster · DE

Funding

DEVELOPMENTAL BIOLOGY TRAINING PROGRAMT32HD007491 · NICHD · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI James Alan Gagnon, Kristen M Kwan · 1995 to 2026
$8.0M
Analysis of nonsense mediated mRNA decay in DrosophilaR01GM084011 · NIGMS · UNIVERSITY OF UTAH · PI METZSTEIN, MARK M · 2008 to 2012
$1.4M
NICHD NIH HHS T32 HD007491NIGMS NIH HHS R01 GM084011
6 · The paper itself

Abstract

The nonsense-mediated messenger RNA (mRNA) decay (NMD) pathway is a cellular quality control and post-transcriptional gene regulatory mechanism and is essential for viability in most multicellular organisms . A complex of proteins has been identified to be required for NMD function to occur; however, there is an incomplete understanding of the individual contributions of each of these factors to the NMD process. Central to the NMD process are three proteins, Upf1 (SMG-2), Upf2 (SMG-3), and Upf3 (SMG-4), which are found in all eukaryotes, with Upf1 and Upf2 being absolutely required for NMD in all organisms in which their functions have been examined. The other known NMD factors, Smg1, Smg5, Smg6, and Smg7, are more variable in their presence in different orders of organisms and are thought to have a more regulatory role. Here we present the first genetic analysis of the NMD factor

Indexed as

AnimalsCarrier ProteinsDrosophilaDrosophila ProteinsEndoribonucleasesGene Expression RegulationMutationNonsense Mediated mRNA DecayNuclear ProteinsProtein Serine-Threonine KinasesRNA, MessengerCarrier ProteinsDrosophila ProteinsEndoribonucleasesnonC protein, DrosophilaNuclear ProteinsProtein Serine-Threonine KinasesRNA, MessengerSmg5 protein, DrosophilaSMG6 protein, DrosophilaDrosophilaNMDnonsense-mediated mRNA decaypcmSmg5Smg6Xrn1

Identifiers

PMID29903866
PMCPMC6063230
OpenAlexW2808156101

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.