Evidence map›Paper›PMID 29900115›Full record

ArticleEuPA open proteomics2016

Top-down proteomic characterization of DAOY medulloblastoma tumor cell line.

Claudia Martelli, Luca D'Angelo, Marta Barba, Mirko Baranzini, Ilaria Inserra, Federica Iavarone, Federica Vincenzoni, Gianpiero Tamburrini, Luca Massimi, Concezio Di Rocco and 6 more

Abstract read
In one paragraph

Article in EuPA open proteomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. A systematic view of pediatric medulloblastoma proteomics-current state of the field and future directions.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2021
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Claudia MartelliIstituto di Biochimica e Biochimica Clinica, Università' Cattolica del Sacro Cuore, Rome, Italy.
Luca D'AngeloIstituto di Biochimica e Biochimica Clinica, Università' Cattolica del Sacro Cuore, Rome, Italy.
Marta BarbaIstituto di Anatomia Umana e Biologia Cellulare, Università Cattolica del Sacro Cuore, Rome, Italy.
Mirko BaranziniIstituto di Anatomia Umana e Biologia Cellulare, Università Cattolica del Sacro Cuore, Rome, Italy.
Ilaria InserraIstituto di Biochimica e Biochimica Clinica, Università' Cattolica del Sacro Cuore, Rome, Italy.
Federica IavaroneIstituto di Biochimica e Biochimica Clinica, Università' Cattolica del Sacro Cuore, Rome, Italy.
Federica VincenzoniIstituto di Biochimica e Biochimica Clinica, Università' Cattolica del Sacro Cuore, Rome, Italy.
Gianpiero TamburriniReparto di Neurochirurgia Infantile, Istituto di Neurochirurgia, Policlinico A. Gemelli, Rome, Italy.
Luca MassimiReparto di Neurochirurgia Infantile, Istituto di Neurochirurgia, Policlinico A. Gemelli, Rome, Italy.
Concezio Di RoccoReparto di Neurochirurgia Infantile, Istituto di Neurochirurgia, Policlinico A. Gemelli, Rome, Italy.
Massimo CaldarelliReparto di Neurochirurgia Infantile, Istituto di Neurochirurgia, Policlinico A. Gemelli, Rome, Italy.
Irene MessanaDipartimento di Scienze della Vita e dell'Ambiente, Università di Cagliari, Monserrato (CA), Italy.
Fabrizio MichettiIstituto di Anatomia Umana e Biologia Cellulare, Università Cattolica del Sacro Cuore, Rome, Italy.
Massimo CastagnolaIstituto di Biochimica e Biochimica Clinica, Università' Cattolica del Sacro Cuore, Rome, Italy.
Wanda LattanziIstituto di Anatomia Umana e Biologia Cellulare, Università Cattolica del Sacro Cuore, Rome, Italy.
Claudia DesiderioIstituto di Chimica del Riconoscimento Molecolare, Consiglio Nazionale delle Ricerche, Rome, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The proteome of the DAOY medulloblastoma cell line has been investigated by an LC-MS top-down platform. This approach, unlike bottom-up ones, allows identifying proteins and peptides in their intact/native forms, disclosing post-translational modifications, proteoforms and naturally occurring peptides. Indeed, 25 out of the 53 proteins identified, were not previously characterized in DAOY cells. Most of them were functionally interconnected, being mainly involved in binding, catalytic and structural activities, and metabolic processes. The top-down approach, applied in this preliminary study, disclosed the presence of several naturally occurring peptide fragments that characterize DAOY cells.

Indexed as

DAOY cell lineMedulloblastomaPeptidomeProteomeTop-down proteomics

Identifiers

PMID29900115
PMCPMC5988510

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.