Evidence map›Paper›PMID 29899518›Full record

ArticleThe ISME journal2018

An intriguing relationship between the cyclic diguanylate signaling system and horizontal gene transfer.

Jonas S Madsen, Ole Hylling, Samuel Jacquiod, Sophia Pécastaings, Lars H Hansen, Leise Riber, Gisle Vestergaard, Søren J Sørensen

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jonas S MadsenDepartment of Biology, University of Copenhagen, Universitetsparken 15, DK-2100, Copenhagen, Denmark.
Ole HyllingDepartment of Biology, University of Copenhagen, Universitetsparken 15, DK-2100, Copenhagen, Denmark.ORCID http://orcid.org/0000-0003-2611-7146
Samuel JacquiodDepartment of Biology, University of Copenhagen, Universitetsparken 15, DK-2100, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-0713-7996
Sophia PécastaingsLaboratoire de Génie Chimique UMR 5503, BioSym Department, Université Paul Sabatier, Université de Toulouse, 35 chemin des Maraîchers, 31062, Toulouse, France.
Lars H HansenDepartment of Environment Sciences, Aarhus University, Frederiksborgvej 399, DK-4000, Roskilde, Denmark.
Leise RiberDepartment of Biology, University of Copenhagen, Universitetsparken 15, DK-2100, Copenhagen, Denmark.
Gisle VestergaardDepartment of Biology, University of Copenhagen, Universitetsparken 15, DK-2100, Copenhagen, Denmark.
Søren J SørensenDepartment of Biology, University of Copenhagen, Universitetsparken 15, DK-2100, Copenhagen, Denmark. sjs@bio.ku.dk.ORCID http://orcid.org/0000-0001-6227-9906
University of Copenhagen · DKAarhus University · DKUniversité Toulouse III - Paul Sabatier · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The second messenger cyclic diguanylate (c-di-GMP) is ubiquitously used by bacteria to modulate and shift between different phenotypes including motility, biofilm formation and virulence. Here we show that c-di-GMP-associated genes are widespread on plasmids and that enzymes that synthesize or degrade c-di-GMP are preferentially encoded on transmissible plasmids. Additionally, expression of enzymes that synthesize c-di-GMP was found to increase both biofilm formation and, interestingly, conjugative plasmid transfer rates.

Indexed as

Gene Transfer, HorizontalBacteriaBacterial Physiological PhenomenaBiofilmsCyclic GMPPlasmidsSignal TransductionVirulencebis(3',5')-cyclic diguanylic acidCyclic GMP

Identifiers

PMID29899518
PMCPMC6092375
OpenAlexW2808370848

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.