Evidence map›Paper›PMID 29899430›Full record

ArticleScientific reports2018

Quantification of cyanobacterial cells via a novel imaging-driven technique with an integrated fluorescence signature.

Chao Jin, Maria M F Mesquita, Jason L Deglint, Monica B Emelko, Alexander Wong

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Chao JinDepartment of Civil and Environmental Engineering, University of Waterloo, Waterloo, Ontario, N2L 3G1, Canada. j3chao@uwaterloo.ca.
Maria M F MesquitaDepartment of Civil and Environmental Engineering, University of Waterloo, Waterloo, Ontario, N2L 3G1, Canada.
Jason L DeglintDepartment of Systems Design Engineering, University of Waterloo, Waterloo, Ontario, N2L 3G1, Canada.
Monica B EmelkoDepartment of Civil and Environmental Engineering, University of Waterloo, Waterloo, Ontario, N2L 3G1, Canada.
Alexander WongDepartment of Systems Design Engineering, University of Waterloo, Waterloo, Ontario, N2L 3G1, Canada.
University of Waterloo · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel imaging-driven technique with an integrated fluorescence signature to enable automated enumeration of two species of cyanobacteria and an alga of somewhat similar morphology to one of the cyanobacteria is presented to demonstrate proof-of-concept that high accuracy, imaging-based, rapid water quality analysis can be with conventional equipment available in typical water quality laboratories-this is not currently available. The results presented herein demonstrate that the developed method identifies and enumerates cyanobacterial cells at a level equivalent to or better than that achieved using standard manual microscopic enumeration techniques, but in less time, and requiring significantly fewer resources. When compared with indirect measurement methods, the proposed method provides better accuracy at both low and high cell concentrations. It extends the detection range for cell enumeration while maintaining accuracy and increasing enumeration speed. The developed method not only accurately estimates cell concentrations, but it also reliably distinguishes between cells of Anabaena flos-aquae, Microcystis aeruginosa, and Ankistrodesmus in mixed cultures by taking advantage of additional contrast between the target cell and complex background gained under fluorescent light. Thus, the proposed image-driven approach offers promise as a robust and cost-effective tool for identifying and enumerating microscopic cells based on their unique morphological features.

Indexed as

FluorescenceAnabaenaChlorophyceaeCost-Benefit AnalysisMicrobiological TechniquesMicrocystisReproducibility of Results

Identifiers

PMID29899430
PMCPMC5998128
OpenAlexW2806848944

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.