Evidence map›Paper›PMID 29899041›Full record

ArticleThe Journal of cell biology2018

SPATA7 maintains a novel photoreceptor-specific zone in the distal connecting cilium.

Rachayata Dharmat, Aiden Eblimit, Michael A Robichaux, Zhixian Zhang, Thanh-Minh T Nguyen, Sung Yun Jung, Feng He, Antrix Jain, Yumei Li, Jun Qin and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Article
  3. Ciliary Defects in Inherited Retinal Diseases.Advanced genetics (Hoboken, N.J.) · 2026
    Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Double Hyperautofluorescence Rings as a Sign of CFAP410-related Retinopathy.Investigative ophthalmology & visual science · 2023
    Article
  14. Article
  15. Expansion Microscopy of Mouse Photoreceptor Cilia.Advances in experimental medicine and biology · 2023
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 2 countries.

Rachayata DharmatMolecular and Human Genetics, Baylor College of Medicine, Houston, TX.ORCID 0000-0001-6969-4459
Aiden EblimitHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX.
Michael A RobichauxVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX.
Zhixian ZhangVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX.
Thanh-Minh T NguyenDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, Netherlands.
Sung Yun JungVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX.
Feng HeVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX.
Antrix JainVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX.ORCID 0000-0002-2815-3645
Yumei LiHuman Genome Sequencing Center, Baylor College of Medicine, Houston, TX.
Jun QinVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX.
Paul OverbeekMolecular and Human Genetics, Baylor College of Medicine, Houston, TX.ORCID 0000-0001-9784-2084
Ronald RoepmanDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, Netherlands.
Graeme MardonMolecular and Human Genetics, Baylor College of Medicine, Houston, TX.ORCID 0000-0003-4265-4072
Theodore G WenselVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX.ORCID 0000-0003-3518-9352
Rui ChenMolecular and Human Genetics, Baylor College of Medicine, Houston, TX ruichen@bcm.edu.ORCID 0000-0002-4387-9735
Baylor College of Medicine · USRadboud University Nijmegen · NL

Funding

VISION RESEARCH CENTERP30EY002520 · NEI · BAYLOR COLLEGE OF MEDICINE · PI Samuel M Wu · 1985 to 2026
$14.8M
GENETICS OF EARLY ONSET RETINAL DISEASESR01EY018571 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI RUI CHEN · 2008 to 2026
$7.2M
Trasnducin Interactions with Photoreceptor MembranesR01EY007981 · NEI · BAYLOR COLLEGE OF MEDICINE · PI WENSEL, THEODORE G · 1989 to 2016
$6.1M
Molecular Basis of Human Visual System DisordersR01EY022356 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI RUI CHEN · 2012 to 2026
$6.1M
RGS Protein Function in Mammalian RetinaR01EY011900 · NEI · BAYLOR COLLEGE OF MEDICINE · PI WENSEL, THEODORE G · 1998 to 2010
$4.4M
Cilium-Associated Structures in Rod CellsR01EY026545 · NEI · BAYLOR COLLEGE OF MEDICINE · PI WENSEL, THEODORE G · 2016 to 2024
$3.7M
Molecular Mechanisms of Human Retinal DiseaseR01EY020540 · NEI · BAYLOR COLLEGE OF MEDICINE · PI CHEN, RUI, MARDON, GRAEME · 2011 to 2017
$2.3M
Light regulation of retinal phosphoinositidesR01EY025218 · NEI · BAYLOR COLLEGE OF MEDICINE · PI WENSEL, THEODORE G · 2016 to 2019
$1.6M
Super resolution analysis of the subcellular effects of retinal gene therapyF32EY027171 · NEI · BAYLOR COLLEGE OF MEDICINE · PI ROBICHAUX, MICHAEL · 2016 to 2018
$180k
NEI NIH HHS F32 EY027171NEI NIH HHS P30 EY002520NEI NIH HHS R01 EY007981NEI NIH HHS R01 EY011900NEI NIH HHS R01 EY018571NEI NIH HHS R01 EY020540NEI NIH HHS R01 EY022356NEI NIH HHS R01 EY025218NEI NIH HHS R01 EY026545
6 · The paper itself

Abstract

Photoreceptor-specific ciliopathies often affect a structure that is considered functionally homologous to the ciliary transition zone (TZ) called the connecting cilium (CC). However, it is unclear how mutations in certain ciliary genes disrupt the photoreceptor CC without impacting the primary cilia systemically. By applying stochastic optical reconstruction microscopy technology in different genetic models, we show that the CC can be partitioned into two regions: the proximal CC (PCC), which is homologous to the TZ of primary cilia, and the distal CC (DCC), a photoreceptor-specific extension of the ciliary TZ. This specialized distal zone of the CC in photoreceptors is maintained by SPATA7, which interacts with other photoreceptor-specific ciliary proteins such as RPGR and RPGRIP1. The absence of

Indexed as

Adaptor Proteins, Signal TransducingAnimalsAntigens, NeoplasmCarrier ProteinsCell Cycle ProteinsCytoskeletal ProteinsDNA-Binding ProteinsEye ProteinsMiceMice, Inbred C57BLNuclear ProteinsPhotoreceptor Connecting CiliumProtein TransportAdaptor Proteins, Signal TransducingAntigens, NeoplasmCarrier ProteinsCell Cycle ProteinsCep290 protein, mouseCytoskeletal ProteinsDNA-Binding ProteinsEye ProteinsFtm protein, mouseNuclear ProteinsRPGR protein, mouseSPATA7 protein, mouse

Identifiers

PMID29899041
PMCPMC6080925
OpenAlexW2808100256

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.