Evidence map›Paper›PMID 29898404›Full record

ArticleCell reports2018

UCHL3 Regulates Topoisomerase-Induced Chromosomal Break Repair by Controlling TDP1 Proteostasis.

Chunyan Liao, Ryan Beveridge, Jessica J R Hudson, Jacob D Parker, Shih-Chieh Chiang, Swagat Ray, Mohamed E Ashour, Ian Sudbery, Mark J Dickman, Sherif F El-Khamisy

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 58 citations in OpenAlex.

  1. Trial
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  11. Deubiquitylating Enzymes in Cancer and Immunity.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Review
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  13. Article
  14. Review
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  20. Saudi journal of biological sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Chunyan LiaoKrebs Institute, Department of Molecular Biology and Biotechnology, Firth Court, University of Sheffield, S10 2TN Sheffield, UK.
Ryan BeveridgeKrebs Institute, Department of Molecular Biology and Biotechnology, Firth Court, University of Sheffield, S10 2TN Sheffield, UK.
Jessica J R HudsonKrebs Institute, Department of Molecular Biology and Biotechnology, Firth Court, University of Sheffield, S10 2TN Sheffield, UK; Genome Damage and Stability Centre, University of Sussex, Brighton, UK.
Jacob D ParkerKrebs Institute, Department of Molecular Biology and Biotechnology, Firth Court, University of Sheffield, S10 2TN Sheffield, UK.
Shih-Chieh ChiangKrebs Institute, Department of Molecular Biology and Biotechnology, Firth Court, University of Sheffield, S10 2TN Sheffield, UK.
Swagat RayKrebs Institute, Department of Molecular Biology and Biotechnology, Firth Court, University of Sheffield, S10 2TN Sheffield, UK.
Mohamed E AshourCenter for Genomics, Helmy Institute, Zewail City of Science and Technology, Giza, Egypt.
Ian SudberyKrebs Institute, Department of Molecular Biology and Biotechnology, Firth Court, University of Sheffield, S10 2TN Sheffield, UK.
Mark J DickmanDepartment of Chemical and Biological Engineering, University of Sheffield, Sheffield, UK.
Sherif F El-KhamisyKrebs Institute, Department of Molecular Biology and Biotechnology, Firth Court, University of Sheffield, S10 2TN Sheffield, UK; Center for Genomics, Helmy Institute, Zewail City of Science and Technology, Giza, Egypt. Electronic address: s.el-khamisy@sheffield.ac.uk.
University of Sheffield · GBZewail City of Science and Technology · EG

Funding

Biotechnology and Biological Sciences Research Council BB/M012166/1Biotechnology and Biological Sciences Research Council BB/MO12166/1Wellcome Trust
6 · The paper itself

Abstract

Genomic damage can feature DNA-protein crosslinks whereby their acute accumulation is utilized to treat cancer and progressive accumulation causes neurodegeneration. This is typified by tyrosyl DNA phosphodiesterase 1 (TDP1), which repairs topoisomerase-mediated chromosomal breaks. Although TDP1 levels vary in multiple clinical settings, the mechanism underpinning this variation is unknown. We reveal that TDP1 is controlled by ubiquitylation and identify UCHL3 as the deubiquitylase that controls TDP1 proteostasis. Depletion of UCHL3 increases TDP1 ubiquitylation and turnover rate and sensitizes cells to TOP1 poisons. Overexpression of UCHL3, but not a catalytically inactive mutant, suppresses TDP1 ubiquitylation and turnover rate. TDP1 overexpression in the topoisomerase therapy-resistant rhabdomyosarcoma is driven by UCHL3 overexpression. In contrast, UCHL3 is downregulated in spinocerebellar ataxia with axonal neuropathy (SCAN1), causing elevated levels of TDP1 ubiquitylation and faster turnover rate. These data establish UCHL3 as a regulator of TDP1 proteostasis and, consequently, a fine-tuner of protein-linked DNA break repair.

Indexed as

DNA RepairCell Line, TumorChromosome BreakageCysteine EndopeptidasesDNA Topoisomerases, Type IDown-RegulationHEK293 CellsHumansNucleotidasesPhosphoric Diester HydrolasesProteostasisRNA InterferenceRNA, Small InterferingUbiquitinUbiquitinationUbiquitin ThiolesteraseCANT1 protein, humanCysteine EndopeptidasesDNA Topoisomerases, Type INucleotidasesPhosphoric Diester HydrolasesRNA, Small InterferingTDP1 protein, humanUbiquitinUbiquitin ThiolesteraseUCHL3 protein, humanagingcancerheart failuremyocardial infarctionneurodegenerationrhabdosarcomaSCAN1TDPtopoisomeraseUCHL3

Identifiers

PMID29898404
PMCPMC6019701
OpenAlexW2808172171

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.