Evidence map›Paper›PMID 29898247›Full record

ArticleEuropean journal of immunology2018

BATF regulates the expression of Nfil3, Wnt10a and miR155hg for efficient induction of antibody class switch recombination in mice.

Rosemary E Morman, Patrick G Schweickert, Stephen F Konieczny, Elizabeth J Taparowsky

Abstract read
In one paragraph

Article in European journal of immunology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Rosemary E MormanDepartment of Biological Sciences and Purdue University Center for Cancer Research, Purdue University, West Lafayette, IN, USA.
Patrick G SchweickertDepartment of Biological Sciences and Purdue University Center for Cancer Research, Purdue University, West Lafayette, IN, USA.
Stephen F KoniecznyDepartment of Biological Sciences and Purdue University Center for Cancer Research, Purdue University, West Lafayette, IN, USA.
Elizabeth J TaparowskyDepartment of Biological Sciences and Purdue University Center for Cancer Research, Purdue University, West Lafayette, IN, USA.ORCID 0000-0002-4677-9369
Purdue University West Lafayette · US

Funding

Transgenic Mouse Core Facility Shared Resource (TMCF-SR)P30CA023168 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI Andrea L Kasinski · 1985 to 2026
$43.4M
Quality Assurance and Quality Control Project Management: Improving Submissions and Study Conduct in the Human Subjects Research Prior Approval ProcessUL1TR002529 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI MOE, SHARON M, WIEHE, SARAH ELIZABETH · 2018 to 2022
$27.2M
Indiana Clinical and Translational Sciences InstituteUL1TR001108 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI DENNE, SCOTT C., SHEKHAR, ANANTHA · 2013 to 2017
$23.3M
Kras-Induced Cellular Plasticity in Pancreatic CancerR01CA124586 · NCI · PURDUE UNIVERSITY · PI KONIECZNY, STEPHEN F · 2008 to 2017
$3.1M
Indiana Clinical and Translational Sciences InstituteTL1TR001107 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI DENNE, SCOTT C., SHEKHAR, ANANTHA · 2013 to 2017
$2.0M
BD Fortessa Flow Cytometer for Multi-User Shared FacilityS10OD020029 · OD · PURDUE UNIVERSITY · PI RATLIFF, TIMOTHY L. · 2015 to 2015
$412k
Determinants of BATF FunctionR21AI105620 · NIAID · PURDUE UNIVERSITY · PI TAPAROWSKY, ELIZABETH J · 2014 to 2015
$409k
NCATS NIH HHS NIH UL1 TR002529NCATS NIH HHS TL1 TR001107NCATS NIH HHS UL1 TR001108NCI NIH HHS NIH P30 CA023168NCI NIH HHS P30 CA023168NIAID NIH HHS R21 AI105620NIH HHS S10 OD020029
6 · The paper itself

Abstract

BATF functions in T cells and B cells to control the host response to antigen and promote the production of class switched immunoglobulins. In this study, we demonstrate that BATF expression increases rapidly, and transiently, following B cell stimulation and use an inducible murine model of BATF deletion to show that this induction is necessary, and sufficient, for immunoglobulin (Ig) class switch recombination (CSR). We examine two genes (Nfil3 and miR155gh) that are positively regulated, and one gene (Wnt10a) that is negatively regulated by BATF during CSR. These genes play essential roles in CSR and each impacts the expression and/or function of the others. Our observations allow these targets of BATF regulation to be positioned in a network upstream of the activation of germline transcripts (GLT) from the IgH locus and of transcriptional activation of Aicda - the gene encoding the enzyme directing Ig gene rearrangements. This work extends the knowledge of the molecular control of CSR and, importantly, positions the induction and function of BATF as an early event in this process.

Indexed as

AICDA (Activation-Induced Cytidine Deaminase)AnimalsBasic-Leucine Zipper Transcription FactorsB-LymphocytesCells, CulturedCytidine DeaminaseImmunoglobulin Class SwitchingImmunoglobulin IsotypesLymphocyte ActivationMiceMice, Inbred C57BLMice, TransgenicMicroRNAsNerve Tissue ProteinsTranscriptional ActivationWnt ProteinsAICDA (Activation-Induced Cytidine Deaminase)Basic-Leucine Zipper Transcription FactorsBatf protein, mouseCytidine DeaminaseImmunoglobulin IsotypesMicroRNAsMirn155 microRNA, mouseNerve Tissue ProteinsNfil3 protein, mouseWnt10a protein, mouseWnt ProteinsBATFB cellsclass switch recombinationsignaling pathwaystranscription regulation

Identifiers

PMID29898247
PMCPMC6357966
OpenAlexW2807990362

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.