Evidence map›Paper›PMID 29898015›Full record

ArticleMemorias do Instituto Oswaldo Cruz2018

Potential overestimation of HIV-1 sub-subtype F1 circulation in Rio de Janeiro, Brazil.

Bianca Cristina Leires Marques, Mariza Gonçalves Morgado, Monick Lindenmeyer Guimarães

Abstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Bianca Cristina Leires MarquesFundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Aids e Imunologia Molecular, Rio de Janeiro, RJ, Brasil.
Mariza Gonçalves MorgadoFundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Aids e Imunologia Molecular, Rio de Janeiro, RJ, Brasil.
Monick Lindenmeyer GuimarãesFundação Oswaldo Cruz-Fiocruz, Instituto Oswaldo Cruz, Laboratório de Aids e Imunologia Molecular, Rio de Janeiro, RJ, Brasil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Brazil, detection of the HIV-1 sub-subtype F1 has decreased with a simultaneous increase in detection of the recombinant FB and FC forms. In previous HIV-1 env molecular epidemiology studies in Rio de Janeiro, 11.4% of the detected sequences were of the F1 sub-subtype. With the goal of re-estimating the prevalence of the HIV-1 F1 sub-subtype, we performed extended analyses of these samples by examining five genomic regions, resulting in 3.3% being confirmed as F1. Moreover, genomic analysis of 11 of the 21 samples identified as F1 confirmed that nine were F1 and two were BF1. Considering the number of samples assayed, the prevalence of F1 was quite low, which supports the use of different genomic regions for the assessment of HIV-1 classification in countries where several subtypes and recombinant forms co-circulate.

Indexed as

Base SequenceBrazilGenome, ViralGenotypeHIV-1HIV InfectionsHumansMolecular EpidemiologyPhylogenySequence Analysis, DNA

Identifiers

PMID29898015
PMCPMC5989490

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.