Evidence map›Paper›PMID 29897940›Full record

ArticlePloS one2018

Reemergence of human plague in Yunnan, China in 2016.

Liyuan Shi, Guirong Yang, Zhikai Zhang, Lianxu Xia, Ying Liang, Hongli Tan, Jinrong He, Jianguo Xu, Zhizhong Song, Wei Li and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 49 citations in OpenAlex.

  1. Abundance ofPathogens (Basel, Switzerland) · 2026
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  8. AncientProceedings. Biological sciences · 2023
    Article
  9. Complete mitochondrial genome ofFrontiers in veterinary science · 2023
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Site 2 of the Yersinia pestis substrate-binding protein YfeA is a dynamic surface metal-binding site.Acta crystallographica. Section F, Structural biology communications · 2021
    Article
  16. ACS infectious diseases · 2021
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Liyuan ShiYunnan Institute for Endemic Disease Control and Prevention, Yunnan, China.
Guirong YangYunnan Institute for Endemic Disease Control and Prevention, Yunnan, China.
Zhikai ZhangNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease control and Prevention, Changping, Beijing, China.
Lianxu XiaNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease control and Prevention, Changping, Beijing, China.
Ying LiangNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease control and Prevention, Changping, Beijing, China.
Hongli TanYunnan Institute for Endemic Disease Control and Prevention, Yunnan, China.
Jinrong HeNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease control and Prevention, Changping, Beijing, China.
Jianguo XuNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease control and Prevention, Changping, Beijing, China.
Zhizhong SongYunnan Institute for Endemic Disease Control and Prevention, Yunnan, China.
Wei LiNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease control and Prevention, Changping, Beijing, China.ORCID 0000-0003-0968-400X
Peng WangYunnan Institute for Endemic Disease Control and Prevention, Yunnan, China.
National Institute for Communicable Disease Control and Prevention · CNYunnan Institute of Endemic Diseases Control and Prevention · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The third plague pandemic originated from Yunnan Province, China in the middle of the 19th century. The last human plague epidemic in Yunnan occurred from 1986-2005. On June 6, 2016, a case of human plague was reported in the Xishuangbanna Prefecture, Yunnan. The patient suffered from primary septicemic plague after exposure to a dead house rat (Rattus flavipectus), which has been identified as the main plague reservoir in the local epizootic area. Moreover, a retrospective investigation identified another bubonic plague case in this area. Based on these data, human plague reemerged after a silent period of ten years. In this study, three molecular typing methods, including a clustered regularly interspaced short palindromic repeats (CRISPR) analysis, different region analysis (DFR), and multiple-locus variable number of tandem repeats analysis (MLVA), were used to illustrate the molecular characteristics of Yersinia pestis (Y. pestis) strains isolated in Yunnan. The DFR profiles of the strains isolated in Yunnan in 2016 were the same as the strains that had previously been isolated in this Rattus flavipectus plague focus. The c3 spacer present in the previously isolated strains was absent in the spacer arrays of the Ypc CRISPR loci of the strains isolated in 2016. The MLVA analysis using MLVA (14+12) showed that the strains isolated from the human plague case and host animal plague infection in 2016 in Yunnan displayed different molecular patterns than the strains that had previously been isolated from Yunnan and adjacent provinces.

Indexed as

AgedAnimalsChinaFemaleGenotypeHumansPhylogenyPlagueRatsYersinia pestis

Identifiers

PMID29897940
PMCPMC5999221
OpenAlexW2808329680

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.