Evidence map›Paper›PMID 29896179›Full record

ArticleFrontiers in microbiology2018

IL-1R and MyD88 Contribute to the Absence of a Bacterial Microbiome on the Healthy Murine Cornea.

Stephanie J Wan, Aaron B Sullivan, Peyton Shieh, Matteo M E Metruccio, David J Evans, Carolyn R Bertozzi, Suzanne M J Fleiszig

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

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  6. Contact Lens Wear Alters Transcriptional Responses tobioRxiv : the preprint server for biology · 2024
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  11. Review
  12. Nerve-associated transient receptor potential ion channels can contribute to intrinsic resistance to bacterial adhesion in vivo.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2021
    Article
  13. Review
  14. Conjunctival Commensal Isolation and Identification in Mice.Journal of visualized experiments : JoVE · 2021
    Article
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Stephanie J WanVision Science Program, University of California, Berkeley, Berkeley, CA, United States.
Aaron B SullivanSchool of Optometry, University of California, Berkeley, Berkeley, CA, United States.
Peyton ShiehCollege of Chemistry, University of California, Berkeley, Berkeley, CA, United States.
Matteo M E MetruccioSchool of Optometry, University of California, Berkeley, Berkeley, CA, United States.
David J EvansSchool of Optometry, University of California, Berkeley, Berkeley, CA, United States.
Carolyn R BertozziSchool of Optometry, University of California, Berkeley, Berkeley, CA, United States.
Suzanne M J FleiszigSchool of Optometry, University of California, Berkeley, Berkeley, CA, United States.
University of California, Berkeley · USHoward Hughes Medical Institute · US

Funding

TRAINING PROGRAM IN VISION SCIENCET32EY007043 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI Suzanne MJ FLEISZIG · 1985 to 2026
$12.9M
SIGNIFICANCE OF CORNEAL CELL INVASION BY BACTERIAR01EY011221 · NEI · UNIVERSITY OF CALIFORNIA BERKELEY · PI Suzanne MJ FLEISZIG · 1995 to 2026
$8.4M
METABOLIC OLIGOSACCHARIDE ENGINEERINGR01GM058867 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Carolyn Bertozzi · 1999 to 2026
$5.6M
Metabolic Engineering with Bioorthogonal Chemical ReportersR37GM058867 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BERTOZZI, CAROLYN · 2009 to 2018
$4.7M
CONTROL OF MOUSE RETINAL CELL POPULATIONS: RODS &CONESF32EY007043 · NEI · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI AIREY, DAVID C · 2000 to 2000
$31k
NEI NIH HHS F32 EY007043NEI NIH HHS R01 EY011221NEI NIH HHS T32 EY007043NIGMS NIH HHS R01 GM058867NIGMS NIH HHS R37 GM058867
6 · The paper itself

Abstract

Microbial communities are important for the health of mucosal tissues. Traditional culture and gene sequencing have demonstrated bacterial populations on the conjunctiva. However, it remains unclear if the cornea, a transparent tissue critical for vision, also hosts a microbiome. Corneas of wild-type, IL-1R (-/-) and MyD88 (-/-) C57BL/6 mice were imaged after labeling with alkyne-functionalized D-alanine (alkDala), a probe that only incorporates into the peptidoglycan of metabolically active bacteria. Fluorescence

Indexed as

AlkDalabacteriaDMN-TrehomeostasisIL-1Rmicrobiomemurine corneaMyD88

Identifiers

PMID29896179
PMCPMC5986933
OpenAlexW2805386980

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.