ArticleScientific reports2018
Comparative chloroplast genomics and phylogenetics of nine Lindera species (Lauraceae).
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.
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39 citing papers in PubMed, 70 citations in OpenAlex.
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- New insights into the phylogenetic relationships within the Lauraceae from mitogenomes.BMC biology · 2024Article
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- Comparative and phylogenetic analyses of plastid genomes of the medicinally important genusFrontiers in plant science · 2024Article
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- A comparative plastomic analysis ofAoB PLANTS · 2023Article
- Complete chloroplast genomes provide insights into evolution and phylogeny of Zingiber (Zingiberaceae).BMC genomics · 2023Article
- Comparative and phylogenetic analysis of complete chloroplast genomes from sevenFrontiers in plant science · 2023Article
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- Plastid genome evolution of a monophyletic group in the subtribe Lauriineae (Laureae, Lauraceae).Plant diversity · 2022Article
- Comparison of Magnoliaceae Plastomes: Adding NeotropicalPlants (Basel, Switzerland) · 2022Article
- A comparative analysis of complete chloroplast genomes of seven Ocotea species (Lauraceae) confirms low sequence divergence within the Ocotea complex.Scientific reports · 2022Article
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- A comparative phytochemical study of nine Lauraceae species by using chemometric data analysis.PloS one · 2022Article
- Complete plastid genome ofMitochondrial DNA. Part B, Resources · 2022Article
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Authors and funding
6 authors at 2 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Lindera, a core genus of the Lauraceae family, has important economic uses in eastern Asia and North America. However, its historical diversification has not been clarified. In this study, we report nine newly sequenced Lindera plastomes. The plastomes of these nine Lindera species range from 152,211 (L. nacusua) to 152,968 bp (L. metcalfiana) in length, similar to that of another Lauraceae species, Litsea glutinosa (152,618 bp). The length variation of these plastomes derived from the length variation in the loci ycf1, ycf2, ψycf1, and ndhF-ψycf1. Comparing our sequences with other available plastomes in the Lauraceae indicated that eight hypervariable loci, ihbA-trnG, ndhA, ndhF-rpl32, petA-psbJ, psbK-psbI, rps16, trnS-trnG, and ycf1, could serve as DNA barcodes for species delineation, and that the inverted repeats (IRs) showed contraction/expansion. Further phylogenetic analyses were performed using 32 complete plastomes of Lauraceae and seven barcodes from 14 additional species of Lindera and related species in the core Lauraceae. The results showed that these Lindera species grouped into two or four sub-clades, and that two Litsea species and Laurus nobilis were located in the same sub-clade as five Lindera species. These data support a close relationship between the genera Laurus, Lindera, and Litsea, and suggest that Lindera is polyphyletic.
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