Evidence map›Paper›PMID 29891550›Full record

ArticleThe Journal of biological chemistry2018

The role of Twist1 in mutant huntingtin-induced transcriptional alterations and neurotoxicity.

Yanchun Pan, Ying Zhu, Wei Yang, Eric Tycksen, Shaopeng Liu, John Palucki, Linjian Zhu, Yo Sasaki, Mukesh K Sharma, Albert H Kim and 2 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Pain in Huntington's disease and its potential mechanisms.Frontiers in aging neuroscience · 2023
    Review
  11. DNA Methylation in Huntington's Disease.International journal of molecular sciences · 2021
    Review
  12. Article
  13. Epigenetic regulation in Huntington's disease.Neurochemistry international · 2021
    Review
  14. Review
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Yanchun PanFrom the Department of Neurological Surgery.
Ying ZhuFrom the Department of Neurological Surgery.
Wei YangGenome Technology Access Center.
Eric TycksenGenome Technology Access Center.
Shaopeng LiuDepartment of Developmental Biology.
John PaluckiFrom the Department of Neurological Surgery.
Linjian ZhuFrom the Department of Neurological Surgery.
Yo SasakiDepartment of Genetics.
Mukesh K SharmaCenter for Biomedical Informatics.
Albert H KimFrom the Department of Neurological Surgery.
Bo ZhangDepartment of Developmental Biology.
Hiroko YanoFrom the Department of Neurological Surgery, yanoh@wustl.edu.ORCID 0000-0001-6548-0920
Washington University in St. Louis · USNeurological Surgery · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI TIMOTHY J. EBERLEIN · 2001 to 2026
$128.0M
WU INSTITUTE OF CLINICAL AND TRANSLATIONAL SCIENCESUL1TR002345 · NCATS · WASHINGTON UNIVERSITY · PI William G. Powderly · 2017 to 2026
$97.8M
Washington University Institute of Clinical and Translational SciencesUL1TR000448 · NCATS · WASHINGTON UNIVERSITY · PI EVANOFF, BRADLEY A · 2012 to 2016
$41.4M
RESEARCH EDUCATION PROGRAM ON COMPUTATIONAL AND STATISTICAL TOOL DEVELOPMENT FOR ADDICTION GENETICSR25DA027995 · NIDA · WASHINGTON UNIVERSITY · PI MADDEN, PAMELA ANN, RICE, JOHN P. · 2009 to 2019
$4.3M
Regulation of Glioblastoma Stem-Like Cells by CDC20-Anaphase-Promoting ComplexR01NS094670 · NINDS · WASHINGTON UNIVERSITY · PI KIM, ALBERT HONG-JAE · 2016 to 2020
$1.7M
Polycomb-mediated epigenetic mechanisms in neurodegeneration and aging brainK01AG033724 · NIA · WASHINGTON UNIVERSITY · PI YANO, HIROKO · 2009 to 2013
$651k
EPIGENETIC AND MRNA PROFILING OF STRIATOPALLIDAL NEURONS IN HUNTINGTON'S DISEASER21NS096603 · NINDS · WASHINGTON UNIVERSITY · PI YANO, HIROKO · 2016 to 2017
$419k
NCATS NIH HHS UL1 TR000448NCATS NIH HHS UL1 TR002345NCI NIH HHS P30 CA091842NIA NIH HHS K01 AG033724NIDA NIH HHS R25 DA027995NINDS NIH HHS R01 NS094670NINDS NIH HHS R21 NS096603
6 · The paper itself

Abstract

Huntington's disease (HD) is a fatal neurodegenerative disorder caused by an abnormal expansion of polyglutamine repeats in the huntingtin protein (Htt). Transcriptional dysregulation is an early event in the course of HD progression and is thought to contribute to disease pathogenesis, but how mutant Htt causes transcriptional alterations and subsequent cell death in neurons is not well understood. RNA-Seq analysis revealed that expression of a mutant Htt fragment in primary cortical neurons leads to robust gene expression changes before neuronal death. Basic helix-loop-helix transcription factor Twist1, which is essential for embryogenesis and is normally expressed at low levels in mature neurons, was substantially up-regulated in mutant Htt-expressing neurons in culture and in the brains of HD mouse models. Knockdown of Twist1 by RNAi in mutant Htt-expressing primary cortical neurons reversed the altered expression of a subset of genes involved in neuronal function and, importantly, abrogated neurotoxicity. Using brain-derived neurotrophic factor (

Indexed as

Epigenesis, GeneticAnimalsBrain-Derived Neurotrophic FactorCells, CulturedDNA MethylationFemaleGene Regulatory NetworksHumansHuntingtin ProteinHuntington DiseaseMaleMiceMutationNeuronsTranscriptional ActivationTwist-Related Protein 1Brain-Derived Neurotrophic FactorHuntingtin ProteinTwist-Related Protein 1brain-derived neurotrophic factor (BDNF)DNA methylationgene expressionHuntington diseaseneurodegenerationneurodegenerative diseaseprimary neuronsRNA-Seqtranscriptional dysregulationtranscription factorTwist1

Identifiers

PMID29891550
PMCPMC6066321
OpenAlexW2808316766

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.