Evidence map›Paper›PMID 29889101›Full record

ArticleThe Journal of clinical investigation2018

GATA6 suppression enhances lung specification from human pluripotent stem cells.

Chia-Min Liao, Somdutta Mukherjee, Amita Tiyaboonchai, Jean Ann Maguire, Fabian L Cardenas-Diaz, Deborah L French, Paul Gadue

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Chia-Min LiaoDepartment of Pathology and Laboratory Medicine, and.
Somdutta MukherjeeCenter for Cellular and Molecular Therapeutics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Amita TiyaboonchaiCenter for Cellular and Molecular Therapeutics, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Jean Ann MaguireDepartment of Pathology and Laboratory Medicine, and.
Fabian L Cardenas-DiazDepartment of Pathology and Laboratory Medicine, and.
Deborah L FrenchDepartment of Pathology and Laboratory Medicine, and.
Paul GadueDepartment of Pathology and Laboratory Medicine, and.
Children's Hospital of Philadelphia · USEmory University Hospital · US

Funding

Epigenic Regulation of Lung Progenitor Repair and RegenerationU01HL110942 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MORRISEY, EDWARD E · 2012 to 2016
$3.4M
Differentiation of human endodermal stem cells into lung lineage cellsF32HL120608 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI LIAO, CHIA-MIN · 2013 to 2016
$163k
NHLBI NIH HHS F32 HL120608NHLBI NIH HHS U01 HL110942
6 · The paper itself

Abstract

The transcription factor GATA6 has been shown to be important for lung development and branching morphogenesis in mouse models, but its role in human lung development is largely unknown. Here, we studied the role of GATA6 during lung differentiation using human pluripotent stem cells. We found that the human stem cell lines most efficient at generating NKX2.1+ lung progenitors express lower endogenous levels of GATA6 during endoderm patterning and that knockdown of GATA6 during endoderm patterning increased the generation of these cells. Complete ablation of GATA6 resulted in the generation of lung progenitors displaying increased cell proliferation with up to a 15-fold expansion compared with control cells, whereas the null cell line displayed a defect in further development into mature lung cell types. Furthermore, transgenic expression of GATA6 at the endoderm anteriorization stage skewed development toward a liver fate at the expense of lung progenitors. Our results suggest a critical dosage effect of GATA6 during human endoderm patterning and a later requirement during terminal lung differentiation. These studies offer an approach of modulating GATA6 expression to enhance the production of lung progenitors from human stem cell sources.

Indexed as

Body PatterningCell DifferentiationCell LineCell LineageGATA6 Transcription FactorGene Knockdown TechniquesHumansLiverLungOrganogenesisPluripotent Stem CellsThyroid Nuclear Factor 1GATA6 protein, humanGATA6 Transcription FactorNKX2-1 protein, humanThyroid Nuclear Factor 1DevelopmentEmbryonic stem cellsHuman stem cellsiPS cellsPulmonology

Identifiers

PMID29889101
PMCPMC6025967
OpenAlexW2805495786

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.