Evidence map›Paper›PMID 29888044›Full record

ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2018

Biopsy Records Do Not Reduce Diagnosis Variability in Cancer Patient EHRs: Are We More Uncertain After Knowing?

Jose-Franck Diaz-Garelli, Brian J Wells, Caleb Yelton, Roy Strowd, Umit Topaloglu

Abstract read
In one paragraph

Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Machine learning approaches to predict early cardiac immune-related adverse events in patients receiving immune checkpoint inhibitors.Supportive care in cancer : official journal of the Multinational Association of Supportive Care in Cancer · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Building Cancer Diagnosis Text to OncoTree Mapping Pipelines for Clinical Sequencing Data Integration and Curation.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2020
    Article
  7. Article
  8. Lost in Translation: Diagnosis Records Show More Inaccuracies After Biopsy in Oncology Care EHRs.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2019
    Article
  9. Exploring the Hazards of Scaling Up Clinical Data Analyses: A Drug Side Effect Discovery Case Report.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jose-Franck Diaz-GarelliWake Forest Baptist Medical Center, Winston Salem, NC.
Brian J WellsWake Forest Baptist Medical Center, Winston Salem, NC.
Caleb YeltonWake Forest Baptist Medical Center, Winston Salem, NC.
Roy StrowdWake Forest Baptist Medical Center, Winston Salem, NC.
Umit TopalogluWake Forest Baptist Medical Center, Winston Salem, NC.

Funding

Tumor Tissue CoreP30CA012197 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI Ruben A. Mesa · 1985 to 2026
$55.4M
Wake Forest Clinical and Translational Science AwardUL1TR001420 · NCATS · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI ARD, JAMY D, FOLEY, KRISTIE L · 2015 to 2023
$32.3M
Postdoctoral Research, Instruction, and Mentoring Experience (PRIME)K12GM102773 · NIGMS · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HOWLETT, ALLYN C · 2013 to 2018
$2.6M
NCATS NIH HHS UL1 TR001420NCI NIH HHS P30 CA012197NIGMS NIH HHS K12 GM102773
6 · The paper itself

Abstract

Diagnostic codes are crucial for analyses of electronic health record (EHR) data but their accuracy and precision are often lacking. Although providers enter precise diagnoses into progress notes, billing standards may limit the particularity of a diagnostic code. Variability also arises from the creation of multiple descriptions for a particular diagnostic code. We hypothesized that the variability of diagnostic codes would be greater before surgical pathology results were recorded in the medical record. A well annotated cohort of patients with brain neoplasms was studied. After diagnostic pathology reporting, the odds of more distinct diagnostic descriptions were 2.30 times higher (p=0.00358), entropy in diagnostic sequences was 2.26 times higher (p=0.0259) and entropy in diagnostic precision scores was 15.5 times higher (p=0.0324). Although diagnostic codes became more distinct on average after diagnostic pathology reporting, there was a paradoxical increase in the variability of the codes selected. Researchers must be aware of the inconsistencies and variability in particularity in structured diagnostic coding despite the presence of a definitive diagnosis.

Identifiers

PMID29888044
PMCPMC5961789

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.