Evidence map›Paper›PMID 29887660›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2018

QUADRATIC: Quality of Dice in Registration Circuits.

Shikha Chaganti, Bennett A Landman

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Shikha ChagantiDepartment of Computer Science, Vanderbilt University.
Bennett A LandmanDepartment of Computer Science, Vanderbilt University.

Funding

Vanderbilt Institute for Clinical and Translational Research (VICTR) -Identifying correlates of functional immunity in SARS-CoV-2 convalescent plasmaUL1TR002243 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Paul A. Harris, Wesley H Self · 2017 to 2026
$130.7M
VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Training Program for Innovative Engineering Research in Surgery and InterventionT32EB021937 · NIBIB · VANDERBILT UNIVERSITY · PI Dario J Englot, Michael Ian Miga · 2016 to 2026
$2.3M
Quantitative Image Analysis Techniques for Optic Nerve DiseaseR21EY024036 · NEI · VANDERBILT UNIVERSITY · PI LANDMAN, BENNETT A. · 2014 to 2015
$410k
NCATS NIH HHS UL1 TR000445NCATS NIH HHS UL1 TR002243NCRR NIH HHS UL1 RR024975NEI NIH HHS R21 EY024036NIBIB NIH HHS T32 EB021937
6 · The paper itself

Abstract

Image registration involves identification of a transformation to fit a target image to a reference image space. The success of the registration process is vital for correct interpretation of the results of many medical image-processing applications, including multi-atlas segmentation. While there are several validation metrics employed in rigid registration to examine the accuracy of the method, non-rigid registrations (NRR) are validated subjectively in most cases, validated in offline cases, or based on image similarity metrics, all of which have been shown to poorly correlate with true registration quality. In this paper, we model the error for each target scan by expanding on the idea of Assessing Quality Using Image Registration Circuits (AQUIRC), which created a model for error "quality" associated with NRR. In this paper, we model the Dice similarity coefficient (DSC) error in the network, for a more interpretable measure. We test four functional models using a leave-one-out strategy to evaluate the relationship between edge DSC and circuit DSC: linear, quadratic, third order, or multiplicative models. We found that the quadratic model most accurately learns the NRR-DSC, with a median correlation coefficient of 0.58 with the true NRR-DSC, we call this the QUADRATIC (QUAlity of Dice in RegistrATIon Circuits) model. The QUADRATIC model is used for multi-atlas segmentation based on majority vote. Choosing the four best atlases predicted from the QUDRATIC model resulted in a 7% increase in the DSC between segmented image and true labels.

Indexed as

AQUIRCatlas selectionerror modelingmajority votemulti-atlasNon-rigid registration

Identifiers

PMID29887660
PMCPMC5990287

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.