Evidence map›Paper›PMID 29887318›Full record

ArticleCell stem cell2018

Paneth Cell Multipotency Induced by Notch Activation following Injury.

Shiyan Yu, Kevin Tong, Yanlin Zhao, Iyshwarya Balasubramanian, George S Yap, Ronaldo P Ferraris, Edward M Bonder, Michael P Verzi, Nan Gao

Open access · bronzeAbstract read
In one paragraph

Article in Cell stem cell, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 191 papers.

0numbers the graph read from it
0cells of the map it votes in
191citing papers in PubMed
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

191 citing papers in PubMed, 273 citations in OpenAlex.

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  6. Building and regenerating intestines by manipulating intestinal stem cells.Nature reviews. Gastroenterology & hepatology · 2026
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131 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Shiyan YuDepartment of Biological Sciences, Rutgers University, Newark, NJ 07102, USA.
Kevin TongDepartment of Genetics, Rutgers University, Piscataway, NJ 08854, USA.
Yanlin ZhaoCenter for Immunity and Inflammation, Rutgers New Jersey Medical School, Newark, NJ 07101, USA.
Iyshwarya BalasubramanianDepartment of Biological Sciences, Rutgers University, Newark, NJ 07102, USA.
George S YapCenter for Immunity and Inflammation, Rutgers New Jersey Medical School, Newark, NJ 07101, USA.
Ronaldo P FerrarisDepartment of Pharmacology, Physiology and Neuroscience, Rutgers New Jersey Medical School, Newark, NJ 07101, USA.
Edward M BonderDepartment of Biological Sciences, Rutgers University, Newark, NJ 07102, USA.
Michael P VerziDepartment of Genetics, Rutgers University, Piscataway, NJ 08854, USA; Rutgers Cancer Institute of New Jersey, New Brunswick, NJ 08903, USA.
Nan GaoDepartment of Biological Sciences, Rutgers University, Newark, NJ 07102, USA; Rutgers Cancer Institute of New Jersey, New Brunswick, NJ 08903, USA. Electronic address: ngao@rutgers.edu.
Rutgers, The State University of New Jersey · USRutgers Cancer Institute of New JerseyRutgers New Jersey Medical School

Funding

Transcriptional Mechanisms of Tumor SuppressionR01CA190558 · NCI · RUTGERS, THE STATE UNIV OF N.J. · PI MICHAEL P. VERZI · 2015 to 2026
$3.6M
Induction of effector lymphocyte lethargy by helminth coinfectionR01AI134040 · NIAID · RBHS-NEW JERSEY MEDICAL SCHOOL · PI GAUSE, WILLIAM CLARK, YAP, GEORGE S. · 2017 to 2021
$2.9M
Endosomal Control of Microbe-Host HomeostasisR01DK102934 · NIDDK · RUTGERS THE STATE UNIV OF NJ NEWARK · PI GAO, NAN · 2014 to 2018
$1.8M
BD FACSAria II for NJMS Flow Cytometry CoreS10RR027022 · NCRR · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI FITZGERALD-BOCARSLY, PATRICIA · 2011 to 2011
$501k
ImageStream X Mark II for NJMS Flow CoreS10OD018103 · OD · RBHS-NEW JERSEY MEDICAL SCHOOL · PI FITZGERALD-BOCARSLY, PATRICIA · 2014 to 2014
$440k
Abrogating a survival pathway in early colon cancer cellsR21CA178599 · NCI · RUTGERS THE STATE UNIV OF NJ NEWARK · PI GAO, NAN · 2013 to 2014
$366k
The Division and Homeostasis of Gut Progenitor CellsR03DK093809 · NIDDK · RUTGERS THE STATE UNIV OF NJ NEWARK · PI GAO, NAN · 2012 to 2013
$152k
SMAD4 in Serrated TumorigenesisF32CA235829 · NCI · RUTGERS, THE STATE UNIV OF N.J. · PI TONG, KEVIN · 2019 to 2020
$89k
NCI NIH HHS F32 CA235829NCI NIH HHS R01 CA190558NCI NIH HHS R21 CA178599NCRR NIH HHS S10 RR027022NIAID NIH HHS R01 AI134040NIDDK NIH HHS R01 DK102934NIDDK NIH HHS R03 DK093809NIH HHS S10 OD018103
6 · The paper itself

Abstract

Paneth cells are post-mitotic intestinal epithelial cells supporting the stem cell niche and mucosal immunity. Paneth cell pathologies are observed in various gastrointestinal diseases, but their plasticity and response to genomic and environmental challenges remain unclear. Using a knockin allele engineered at the mouse Lyz1 locus, we performed detailed Paneth cell-lineage tracing. Irradiation induced a subset of Paneth cells to proliferate and differentiate into villus epithelial cells. RNA sequencing (RNA-seq) revealed that Paneth cells sorted from irradiated mice acquired a stem cell-like transcriptome; when cultured in vitro, these individual Paneth cells formed organoids. Irradiation activated Notch signaling, and forced expression of Notch intracellular domain (NICD) in Paneth cells, but not Wnt/β-catenin pathway activation, induced their dedifferentiation. This study documents Paneth cell plasticity, particularly their ability to participate in epithelial replenishment following stem cell loss, adding to a growing body of knowledge detailing the molecular pathways controlling injury-induced regeneration.

Indexed as

AdenomaAnimalsCells, CulturedDisease Models, AnimalInjections, IntraperitonealInjections, SubcutaneousMiceMice, Inbred C57BLMice, Inbred DBAPaneth CellsReceptors, NotchTamoxifenReceptors, NotchTamoxifenintestinal stem celllysozymeLyz1NotchPaneth cellplasticityRNA-seqWnt

Identifiers

PMID29887318
PMCPMC6035085
OpenAlexW2807022503

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.