Evidence map›Paper›PMID 29884177›Full record

ArticleMicrobial cell factories2018

fabH deletion increases DHA production in Escherichia coli expressing Pfa genes.

Laura Giner-Robles, Beatriz Lázaro, Fernando de la Cruz, Gabriel Moncalián

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Prokaryotic PfaB is a terminal acyltransferase that determines the final PUFA product.Protein science : a publication of the Protein Society · 2026
    Article
  2. Review
  3. Article
  4. Review
  5. Life (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Laura Giner-RoblesDepartamento de Biología Molecular, Universidad de Cantabria and Instituto de Biomedicina y Biotecnología de Cantabria (IBBTEC), CSIC-Universidad de Cantabria, C/ Albert Einstein 22, 39011, Santander, Spain.
Beatriz LázaroDepartamento de Biología Molecular, Universidad de Cantabria and Instituto de Biomedicina y Biotecnología de Cantabria (IBBTEC), CSIC-Universidad de Cantabria, C/ Albert Einstein 22, 39011, Santander, Spain.
Fernando de la CruzDepartamento de Biología Molecular, Universidad de Cantabria and Instituto de Biomedicina y Biotecnología de Cantabria (IBBTEC), CSIC-Universidad de Cantabria, C/ Albert Einstein 22, 39011, Santander, Spain. fernando.cruz@unican.es.
Gabriel MoncaliánDepartamento de Biología Molecular, Universidad de Cantabria and Instituto de Biomedicina y Biotecnología de Cantabria (IBBTEC), CSIC-Universidad de Cantabria, C/ Albert Einstein 22, 39011, Santander, Spain. gabriel.moncalian@unican.es.
Instituto de Biomedicina y Biotecnología de Cantabria · ESUniversidad de Cantabria · ES

Funding

Ministerio de Economía y Competitividad BFU2014-55534-C2
6 · The paper itself

Abstract

backgroundSome marine bacteria, such as Moritella marina, produce the nutraceutical docosahexaenoic acid (DHA) thanks to a specific enzymatic complex called Pfa synthase. Escherichia coli heterologously expressing the pfa gene cluster from M. marina also produces DHA. The aim of this study was to find genetic or metabolic conditions to increase DHA production in E. coli.

resultsFirst, we analysed the effect of the antibiotic cerulenin, showing that DHA production increased twofold. Then, we tested a series of single gene knockout mutations affecting fatty acid biosynthesis, in order to optimize the synthesis of DHA. The most effective mutant, fabH, showed a threefold increase compared to wild type strain. The combination of cerulenin inhibition and fabH deletion rendered a 6.5-fold improvement compared to control strain. Both strategies seem to have the same mechanism of action, in which fatty acid synthesis via the canonical pathway (fab pathway) is affected in its first catalytic step, which allows the substrates to be used by the heterologous pathway to synthesize DHA.

conclusionsDHA-producing E. coli strain that carries a fabH gene deletion boosts DHA production by tuning down the competing canonical biosynthesis pathway. Our approach can be used for optimization of DHA production in different organisms.

Indexed as

AlanineAmino AcidsBoronic AcidsCeruleninDocosahexaenoic AcidsEscherichia coliFatty AcidsGene ExpressionOrganophosphonates2-amino-6-borono-2-(difluoromethyl)hexanoic acidAlanineAmino AcidsBoronic AcidsCeruleninDocosahexaenoic AcidsFatty AcidsOrganophosphonatesphosphonodifluoromethylene alanineCeruleninDocosahexaenoic acidFabHFatty acid synthesisPolyunsaturated fatty acid

Identifiers

PMID29884177
PMCPMC5992819
OpenAlexW2805613936

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.