Evidence map›Paper›PMID 29884115›Full record

ArticleBMC infectious diseases2018

Genetic structures of invasive Streptococcus pneumoniae isolates from Korean children obtained between 1995 and 2013.

Ki Wook Yun, Eun Hwa Choi, Hoan Jong Lee, Jin Han Kang, Kyung-Hyo Kim, Dong Soo Kim, Yae-Jean Kim, Byung Wook Eun, Sung Hee Oh, Hye-Kyung Cho and 14 more

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Serotype Distribution and Antimicrobial Resistance ofAnnals of laboratory medicine · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 19 institutions in 1 country.

Ki Wook YunDepartment of Pediatrics, Seoul National University College of Medicine, 101 Daehak-ro, Jongno-gu, Seoul, 03080, South Korea.
Eun Hwa ChoiDepartment of Pediatrics, Seoul National University College of Medicine, 101 Daehak-ro, Jongno-gu, Seoul, 03080, South Korea. eunchoi@snu.ac.kr.
Hoan Jong LeeDepartment of Pediatrics, Seoul National University College of Medicine, 101 Daehak-ro, Jongno-gu, Seoul, 03080, South Korea.
Jin Han KangDepartment of Pediatrics, College of Medicine, the Catholic University of Korea, Seoul, South Korea.
Kyung-Hyo KimDepartment of Pediatrics, School of Medicine, Ewha Womans University, Seoul, South Korea.
Dong Soo KimDepartment of Pediatrics, Yonsei University College of Medicine, Seoul, South Korea.
Yae-Jean KimDepartment of Pediatrics, Sungkyunkwan University School of Medicine, Samsung Medical Center, Seoul, South Korea.
Byung Wook EunDepartment of Pediatrics, Eulji University School of Medicine, Daejeon, South Korea.
Sung Hee OhDepartment of Pediatrics, Hanyang University, College of Medicine, Seoul, South Korea.
Hye-Kyung ChoDepartment of Pediatrics, Graduate School of Medicine, Gachon University, Incheon, South Korea.
Young Jin HongDepartment of Pediatrics, Inha University School of Medicine, Incheon, South Korea.
Kwang Nam KimDepartment of Pediatrics, Hallym University College of Medicine, Chuncheon, South Korea.
Nam Hee KimDepartment of Pediatrics, Inje University College of Medicine, Seoul, South Korea.
Yun-Kyung KimDepartment of Pediatrics, Korea University College of Medicine, Seoul, South Korea.
Hyunju LeeDepartment of Pediatrics, Seoul National University College of Medicine, 101 Daehak-ro, Jongno-gu, Seoul, 03080, South Korea.
Taekjin LeeDepartment of Pediatrics, CHA Bundang Medical Center, CHA University, Seoul, South Korea.
Hwang Min KimDepartment of Pediatrics, Yonsei University Wonju College of Medicine, Wonju, South Korea.
Eun Young ChoDepartment of Pediatrics, Chungnam National University Hospital, Daejeon, South Korea.
Chun Soo KimDepartment of Pediatrics, Keimyung University School of Medicine, Daegu, South Korea.
Su Eun ParkDepartment of Pediatrics, Pusan National University School of Medicine, Busan, South Korea.
Chi Eun OhDepartment of Pediatrics, Kosin University College of Medicine, Busan, South Korea.
Dae Sun JoDepartment of Pediatrics, Chonbuk National University Medical School, Jeonju, South Korea.
Young Youn ChoiDepartment of Pediatrics, Chonnam National University Medical School, Gwangju, South Korea.
Jina LeeDepartment of Pediatrics, University of Ulsan College of Medicine, Seoul, South Korea.
Seoul National University · KREwha Womans University · KRYonsei University · KRCatholic University of Korea · KRCHA University Bundang Medical Center · KRChonnam National University Hospital · KRChungnam National University Hospital · KREulji University · KRGachon University · KRHanyang University · KRInha University · KRInje University · KRJeonbuk National University · KRKeimyung University · KRKorea University · KRKosin University · KRPusan National University · KRSamsung Medical Center · KRUlsan College · KR

Funding

Ministry of health and welfare, Republic of Korea HI-12C0756
6 · The paper itself

Abstract

backgroundUnderstanding the population genetics of pneumococci will allow detection of changes in the prevalence of circulating genotypes and evidence for capsular switching. We aimed to analyze the genetic structure of invasive pneumococcal isolates obtained from children before and after the use of pneumococcal conjugate vaccines (PCVs) in Korea.

methodsA total of 285 invasive pneumococcal isolates were analyzed using serotyping, multilocus sequence typing, and antimicrobial susceptibility testing. We classified the isolation year to pre-PCV7 (1995-2003; n = 70), post-PCV7 (2004-2010; n = 142), and post-PCV13 (2011-2013; n = 73) periods.

resultsOf the 10 clonal complexes (CCs), antibiotic-resistant international clones, CC320 (31.6%), CC81 (14.7%), and CC166 (6.7%) were the main complexes. Serotype 19A was the main serotype of CC320 throughout the periods. Serotypes of CC81 mainly comprised of 23F (53.3%) in pre-PCV7 period and replaced by non-vaccine types (NVTs; 6C [10%], 13 [30%], 15A [40%], and 15B/C [20%]) in post-PCV13 period. The main serotype responsible for CC166 also changed from 9 V (80%) in pre-PCV7 to NVT 11A (50%) in post-PCV13 periods. Non-susceptibility to penicillin (42.3%) was the highest in CC320, increasing from 0 to 76%.

conclusionThe genetic structures of invasive pneumococcal isolates in Korean children have changed concomitantly with serotype after the implementation of PCVs.

Indexed as

AdolescentAnti-Bacterial AgentsChildChild, PreschoolDNA, BacterialDrug Resistance, BacterialFemaleGenetic VariationGenotypeHumansInfantMaleMicrobial Sensitivity TestsMultilocus Sequence TypingPneumococcal InfectionsPrevalenceAnti-Bacterial AgentsDNA, BacterialChildrenInvasive pneumococcal diseasesMultilocus sequence typingPneumococcal conjugate vaccine

Identifiers

PMID29884115
PMCPMC5994121
OpenAlexW2805748307

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.