Evidence map›Paper›PMID 29882085›Full record

ArticleMolecular biology reports2018

Transcriptional profiles of PBMCs from pigs infected with three genetically diverse porcine reproductive and respiratory syndrome virus strains.

Marzena Rola-Łuszczak, Magdalena Materniak-Kornas, Aneta Pluta, Katarzyna Podgórska, Jens Nielsen, Tomasz Stadejek, Jacek Kuźmak

Open access · hybridAbstract read
In one paragraph

Article in Molecular biology reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Marzena Rola-ŁuszczakDepartment of Biochemistry, National Veterinary Research Institute, Partyzantow 57, 24-100, Pulawy, Poland. mrolka@piwet.pulawy.pl.ORCID http://orcid.org/0000-0003-3209-3427
Magdalena Materniak-KornasDepartment of Biochemistry, National Veterinary Research Institute, Partyzantow 57, 24-100, Pulawy, Poland.
Aneta PlutaDepartment of Biochemistry, National Veterinary Research Institute, Partyzantow 57, 24-100, Pulawy, Poland.
Katarzyna PodgórskaDepartment of Swine Diseases, National Veterinary Research Institute, Partyzantow 57, 24-100, Pulawy, Poland.
Jens NielsenNational Veterinary Institute, Technical University of Denmark, Kalvehave, 4771, Lindholm, Denmark.
Tomasz StadejekDepartment of Pathology and Veterinary Diagnostic, Faculty of Veterinary Medicine, Warsaw University of Life Sciences, Nowoursynowska 159C, 02-776, Warsaw, Poland.
Jacek KuźmakDepartment of Biochemistry, National Veterinary Research Institute, Partyzantow 57, 24-100, Pulawy, Poland.
National Veterinary Research Institute · PLStatens Serum Institut · DKWarsaw University of Life Sciences · PL

Funding

7th Framework Program Project NADIR FP7-2283947th Framework Program Projects PoRRSCon FP7 245141KNOW Scientific Consortium "Healthy Animal - Safe Food" decision of Polish Ministry of Science and Higher Education 05-1/KNOW2/2015Polish National Science Centre project 808/N-COST/2010
6 · The paper itself

Abstract

Porcine reproductive and respiratory syndrome virus is the cause of reproductive failure in sows and respiratory disease in young pigs, which has been considered as one of the most costly diseases to the worldwide pig industry for almost 30 years. This study used microarray-based transcriptomic analysis of PBMCs from experimentally infected pigs to explore the patterns of immune dysregulation after infection with two East European PRRSV strains from subtype 2 (BOR and ILI) in comparison to a Danish subtype 1 strain (DAN). Transcriptional profiles were determined at day 7 post infection in three tested groups of pigs and analysed in comparison with the expression profile of control group. Microarray analysis revealed differential regulation (> 1.5-fold change) of 4253 and 7335 genes in groups infected with BOR and ILI strains, respectively, and of 12518 genes in pigs infected with Danish strain. Subtype 2 PRRSV strains showed greater induction of many genes, especially those involved in innate immunity, such as interferon stimulated antiviral genes and inflammatory markers. Functional analysis of the microarray data revealed a significant up-regulation of genes involved in processes such as acute phase response, granulocyte and agranulocyte adhesion and diapedesis, as well as down-regulation of genes enrolled in pathways engaged in protein synthesis, cell division, as well as B and T cell signaling. This study provided an insight into the host response to three different PRRSV strains at a molecular level and demonstrated variability between strains of different pathogenicity level.

Indexed as

AnimalsBlood CellsImmunity, InnateLeukocytes, MononuclearPorcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusSignal TransductionSwineTranscriptomeHost immune responsePigPRRSVTranscriptome analysis

Identifiers

PMID29882085
PMCPMC6156768
OpenAlexW2805307354

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.