Evidence map›Paper›PMID 29880643›Full record

ArticleThe Journal of biological chemistry2018

Identification of novel binding sites for heparin in receptor protein-tyrosine phosphatase (RPTPσ): Implications for proteoglycan signaling.

Yasuhiro Katagiri, Ashlea A Morgan, Panpan Yu, Nathanael J Bangayan, Radoslaw Junka, Herbert M Geller

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Axonal Regeneration by Glycosaminoglycan.Frontiers in cell and developmental biology · 2021
    Review
  10. Article
  11. Review
  12. Role of Chondroitin Sulfation Following Spinal Cord Injury.Frontiers in cellular neuroscience · 2020
    Review
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yasuhiro KatagiriLaboratory of Developmental Neurobiology, Cell Biology and Physiology Center, NHLBI, National Institutes of Health, Bethesda, Maryland 20892. Electronic address: katagiry@helix.nih.gov.
Ashlea A MorganLaboratory of Developmental Neurobiology, Cell Biology and Physiology Center, NHLBI, National Institutes of Health, Bethesda, Maryland 20892.
Panpan YuLaboratory of Developmental Neurobiology, Cell Biology and Physiology Center, NHLBI, National Institutes of Health, Bethesda, Maryland 20892.
Nathanael J BangayanLaboratory of Developmental Neurobiology, Cell Biology and Physiology Center, NHLBI, National Institutes of Health, Bethesda, Maryland 20892.
Radoslaw JunkaLaboratory of Developmental Neurobiology, Cell Biology and Physiology Center, NHLBI, National Institutes of Health, Bethesda, Maryland 20892.
Herbert M GellerLaboratory of Developmental Neurobiology, Cell Biology and Physiology Center, NHLBI, National Institutes of Health, Bethesda, Maryland 20892.
National Heart Lung and Blood Institute · USNational Institutes of Health · US

Funding

Signaling by Chondroitin Sulfate ProteoglycansZIAHL006021 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI GELLER, HERBERT M. · 2009 to 2022
$12.3M
UCLA Tumor Immunology Training ProgramT32CA009120 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Steven M. Dubinett, MICHAEL A TEITELL · 1985 to 2026
$10.3M
NCI NIH HHS T32 CA009120
6 · The paper itself

Abstract

Receptor protein-tyrosine phosphatase RPTPσ has important functions in modulating neural development and regeneration. Compelling evidence suggests that both heparan sulfate (HS) and chondroitin sulfate (CS) glycosaminoglycans (GAGs) bind to a series of Lys residues located in the first Ig domain of RPTPσ. However, HS promotes and CS inhibits axonal growth. Mutation of these Lys residues abolished binding and signal transduction of RPTPσ to CS, whereas HS binding was reduced, and signaling persisted. This activity was mediated through novel heparin-binding sites identified in the juxtamembrane region. Although different functional outcomes of HS and CS have been previously attributed to the differential oligomeric state of RPTPσ upon GAG binding, we found that RPTPσ was clustered by both heparin and CS GAG rich in 4,6-

Indexed as

Signal TransductionAnimalsCattleChondroitin SulfatesHEK293 CellsHeparan SulfateHeparinHumansMiceProteoglycansReceptor-Like Protein Tyrosine Phosphatases, Class 2Recombinant ProteinsSwineChondroitin SulfatesHeparan SulfateHeparinProteoglycansReceptor-Like Protein Tyrosine Phosphatases, Class 2Recombinant Proteinscell signalingchondroitin sulfateglycosaminoglycanheparan sulfateproteoglycanreceptor tyrosine phosphataseRPTPσ

Identifiers

PMID29880643
PMCPMC6065195
OpenAlexW2883767511

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.