Evidence map›Paper›PMID 29880533›Full record

ArticleCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2019

MicroRNA-Related Genetic Variants Associated with Survival of Head and Neck Squamous Cell Carcinoma.

Owen M Wilkins, Alexander J Titus, Lucas A Salas, Jiang Gui, Melissa Eliot, Rondi A Butler, Erich M Sturgis, Guojun Li, Karl T Kelsey, Brock C Christensen

Abstract readMulticenter Study
In one paragraph

Article in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. A concise review on the role of MIR100HG in human disorders.Journal of cellular and molecular medicine · 2023
    Review
  5. [Advances in risk factors and genetic risk of head and neck squamous cell carcinoma].Lin chuang er bi yan hou tou jing wai ke za zhi = Journal of clinical otorhinolaryngology head and neck surgery · 2022
    Review
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Owen M WilkinsDepartment of Epidemiology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire.
Alexander J TitusDepartment of Epidemiology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire.
Lucas A SalasDepartment of Epidemiology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire.
Jiang GuiDepartment of Biomedical Data Science, Geisel School of Medicine at Dartmouth, Lebanon, New Hampshire.
Melissa EliotDepartment of Epidemiology, Brown University, Providence, Rhode Island.
Rondi A ButlerDepartment of Epidemiology, Brown University, Providence, Rhode Island.
Erich M SturgisDepartment of Head and Neck Surgery, The University of Texas M.D. Anderson Cancer Center, Houston, Texas.
Guojun LiDepartment of Head and Neck Surgery, The University of Texas M.D. Anderson Cancer Center, Houston, Texas.
Karl T KelseyDepartment of Epidemiology, Brown University, Providence, Rhode Island.
Brock C ChristensenDepartment of Epidemiology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire. Brock.C.Christensen@dartmouth.edu.
Dartmouth College · USThe University of Texas MD Anderson Cancer Center · USBrown University · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Fabien Delerue · 1985 to 2026
$290.8M
Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Fred W Kolling IV · 1985 to 2026
$91.3M
Molecular Epidemiology of Head and Neck CancerR01ES011740 · NIEHS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI WEI, QINGYI · 2001 to 2012
$6.3M
The Boston Collaborative Oral Cancer StudyR01CA078609 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI KELSEY, KARL TIMOTHY · 1999 to 2010
$5.3M
Genotypes and Phenotypes of Apoptosis and Risk of Head and Neck CancerR01CA131274 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI WEI, QINGYI · 2009 to 2013
$3.0M
(PQ3) Immune epigenetic biomarkers of bladder cancer outcomesR01CA216265 · NCI · DARTMOUTH COLLEGE · PI CHRISTENSEN, BROCK CLARKE · 2017 to 2021
$2.9M
MicroRNA related genetic variation and head and neck cancerR01DE022772 · NIDCR · DARTMOUTH COLLEGE · PI CHRISTENSEN, BROCK CLARKE · 2013 to 2016
$2.7M
Quantitative Biomedical Sciences at DartmouthT32LM012204 · NLM · DARTMOUTH COLLEGE · PI TOSTESON, TOR D · 2016 to 2020
$876k
MicroRNA Related Genetic Variation in Bladder Cancer Recurrence and SurvivalR21CA175553 · NCI · DARTMOUTH COLLEGE · PI CHRISTENSEN, BROCK CLARKE · 2013 to 2014
$381k
NCI NIH HHS P30 CA016672NCI NIH HHS P30 CA023108NCI NIH HHS R01 CA078609NCI NIH HHS R01 CA131274NCI NIH HHS R01 CA216265NCI NIH HHS R21 CA175553NIDCR NIH HHS R01 DE022772NIEHS NIH HHS R01 ES011740NLM NIH HHS T32 LM012204
6 · The paper itself

Abstract

backgroundHead and neck squamous cell carcinoma (HNSCC) is commonly diagnosed at an advanced stage, and prognosis for such patients is poor. There remains a gap in our understanding of genetic variants related with HNSCC prognosis. miRNA-related single nucleotide polymorphisms (miR-SNPs) are a class of genetic variants with gene-regulatory potential.

methodsWe used a genome-scale approach and independent patient populations in a two-stage approach to test 40,286 common miR-SNPs for association with HNSCC survival in the discovery population (

resultsJoint population analyses identified novel miR-SNPs associated with overall survival in oral and laryngeal cancers. rs1816158, located within long noncoding RNA

conclusionsThis work reveals novel miR-SNPs associated with HNSCC survival, and utilizes miRNA-mRNA interaction and expression data to provide functional support for these associations. IMPACT: These findings extend our understanding of how genetic variation contributes to HNSCC survival, and may contribute to future prognostic models for improved risk stratification.

Indexed as

Gene Expression Regulation, NeoplasticPolymorphism, Single NucleotideAdaptor Proteins, Signal TransducingAgedCase-Control StudiesFemaleGenome-Wide Association StudyHumansMaleMicroRNAsMiddle AgedRNA, MessengerSquamous Cell Carcinoma of Head and NeckAdaptor Proteins, Signal TransducingMicroRNAsMIRN100 microRNA, humanRNA, MessengerSH3BP4 protein, human

Identifiers

PMID29880533
PMCPMC6286226
OpenAlexW2806251510

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.