Evidence map›Paper›PMID 29879815›Full record

ArticleAsian-Australasian journal of animal sciences2019

The study of blood transcriptome profiles in Holstein cows with miscarriage during peri-implantation.

Guoli Zhao, Yanyan Li, Xiaolong Kang, Liang Huang, Peng Li, Jinghang Zhou, Yuangang Shi

Open access · goldAbstract read
In one paragraph

Article in Asian-Australasian journal of animal sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 94% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Guoli ZhaoDepartment of Animal Husbandry, Agricultural College of Ningxia University, Yinchuan, Ningxia 75004, China.
Yanyan LiHelan Mountain Diary Company of Ningxia, Yinchuan, Ningxia 75004, China.
Xiaolong KangDepartment of Animal Husbandry, Agricultural College of Ningxia University, Yinchuan, Ningxia 75004, China.
Liang HuangHelan Mountain Diary Company of Ningxia, Yinchuan, Ningxia 75004, China.
Peng LiDepartment of Animal Husbandry, Agricultural College of Ningxia University, Yinchuan, Ningxia 75004, China.
Jinghang ZhouDepartment of Animal Husbandry, Agricultural College of Ningxia University, Yinchuan, Ningxia 75004, China.
Yuangang ShiDepartment of Animal Husbandry, Agricultural College of Ningxia University, Yinchuan, Ningxia 75004, China.
Ningxia University · CN

Funding

China Agriculture Research System CARS-36National Nature Science Foundation of China 31660645National Nature Science Foundation of China 31760647Ningxia University
6 · The paper itself

Abstract

objectiveIn this study, the transcriptome profile of cow experiencing miscarriage during peri-implantation was investigated.

methodsTotal transcriptomes were checked by RNA sequencing, and the analyzed by bioinformatics methods, the differentially expressed genes (DEGs) were analysed with hierarchical clustering and Kyoto encyclopedia of genes and genomes (KEGG) pathway analysis.

resultsThe results suggested that serum progesterone levels were significantly decreased in cows that miscarried as compared to the pregnant cows at 18, 21, 33, 39, and 51 days after artificial insemination. The RNA sequencing results suggested that 32, 176, 5, 10, and 2 DEGs were identified in the pregnant cows and miscarried cows at 18, 21, 33, 39, and 51 d after artificial insemination. And 15, 101, 1, 2, and 2 DEGs were upregulated, and 17, 74, 4, and 8 DEGs were downregulated in the cows in the pregnant and miscarriage groups, respectively at 18, 21, 33, and 39, but no gene was downregulated at 51 d after artificial insemination. These DEGs were distributed to 13, 20, 3, 6, and 20 pathways, and some pathway essential for pregnancy, such as cell adhesion molecules, tumor necrosis factor signaling pathway and PI3K-Akt signaling pathway.

conclusionThis analysis has identified several genes and related pathways crucial for pregnancy and miscarriage in cows, as well as these genes supply molecular markers to predict the miscarriage in cows.

Indexed as

Differentially Expressed GenesMiscarriagePregnancyProgesteroneRNA Sequencing

Identifiers

PMID29879815
PMCPMC6325397
OpenAlexW2805121954

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.