Evidence map›Paper›PMID 29879455›Full record

ArticleJournal of hepatology2018

hiPSC hepatocyte model demonstrates the role of unfolded protein response and inflammatory networks in α

Charis-Patricia Segeritz, Sheikh Tamir Rashid, Miguel Cardoso de Brito, Maria Paola Serra, Adriana Ordonez, Carola Maria Morell, Joseph E Kaserman, Pedro Madrigal, Nicholas R F Hannan, Laurent Gatto and 7 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of hepatology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 68 citations in OpenAlex.

  1. Pooled it
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  9. Rationale and Design of the Alpha-1 Biomarkers Consortium Study.Chronic obstructive pulmonary diseases (Miami, Fla.) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 2 countries.

Charis-Patricia SegeritzWellcome Trust and MRC Cambridge Stem Cell Institute, Department of Surgery, University of Cambridge, UK; Cambridge Institute for Medical Research, University of Cambridge, UK.
Sheikh Tamir RashidWellcome Trust and MRC Cambridge Stem Cell Institute, Department of Surgery, University of Cambridge, UK; Cambridge Institute for Medical Research, University of Cambridge, UK; Centre for Stem Cells and Regenerative Medicine & Institute for Liver Studies, King's College London, UK. Electronic address: tamir.rashid@kcl.ac.uk.
Miguel Cardoso de BritoWellcome Trust and MRC Cambridge Stem Cell Institute, Department of Surgery, University of Cambridge, UK.
Maria Paola SerraCentre for Stem Cells and Regenerative Medicine & Institute for Liver Studies, King's College London, UK.
Adriana OrdonezCambridge Institute for Medical Research, University of Cambridge, UK.
Carola Maria MorellWellcome Trust and MRC Cambridge Stem Cell Institute, Department of Surgery, University of Cambridge, UK.
Joseph E KasermanCenter for Regenerative Medicine (CReM) of Boston University and Boston Medical Center, Boston, MA 02118, USA.
Pedro MadrigalWellcome Trust and MRC Cambridge Stem Cell Institute, Department of Surgery, University of Cambridge, UK.
Nicholas R F HannanWellcome Trust and MRC Cambridge Stem Cell Institute, Department of Surgery, University of Cambridge, UK.
Laurent GattoCambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Building O, Downing Site, Cambridge CB2 1QW, UK.
Lu TanCambridge Institute for Medical Research, University of Cambridge, UK.
Andrew A WilsonCenter for Regenerative Medicine (CReM) of Boston University and Boston Medical Center, Boston, MA 02118, USA.
Kathryn LilleyCambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Building O, Downing Site, Cambridge CB2 1QW, UK.
Stefan J MarciniakCambridge Institute for Medical Research, University of Cambridge, UK.
Bibek GooptuNIHR Leicester BRC-Respiratory and Leicester Institute of Structural & Chemical Biology, University of Leicester, UK; ISMB/Birkbeck & UCL, University of London, UK; Division of Asthma, Allergy and Lung Biology, King's College London, UK.
David A LomasUCL Respiratory, University College London, UK. Electronic address: d.lomas@ucl.ac.uk.
Ludovic VallierWellcome Trust and MRC Cambridge Stem Cell Institute, Department of Surgery, University of Cambridge, UK; Wellcome Trust Sanger Institute, Genome Campus Hinxton, UK. Electronic address: lv225@cam.ac.uk.
University of Cambridge · GBWellcome/MRC Cambridge Stem Cell Institute · GBBoston University · USKing's College London · GBUniversity College London · GBUniversity of Leicester · GB

Funding

BIOLOGY OF THE LUNG--MULTIDISCIPLINARY PROGRAMT32HL007035 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI Darrell N. Kotton, JOSEPH P MIZGERD · 1985 to 2026
$24.3M
Department of HealthMedical Research Council G0601840Medical Research Council G1002610Medical Research Council MC_PC_12009Medical Research Council MR/L006537/1Medical Research Council MR/N024842/1Medical Research Council MR/R009120/1National Centre for the Replacement, Refinement and Reduction of Animals in Research NC/N001540/1National Centre for the Replacement, Refinement and Reduction of Animals in Research NC/R001987/1NHLBI NIH HHS T32 HL007035Wellcome Trust
6 · The paper itself

Abstract

BACKGROUND &

aimsα

methodsHuman-induced pluripotent stem cell (hiPSC)-derived hepatocytes provide a novel approach to interrogate the molecular mechanisms of A1ATD because of their patient-specific genetic architecture and reflection of human physiology. To that end, we utilised patient-specific hiPSC hepatocyte-like cells (ZZ-HLCs) derived from an A1ATD (ZZ) patient, which faithfully recapitulated key aspects of the disease at the molecular and cellular level. Subsequent functional and "omics" comparisons of these cells with their genetically corrected isogenic-line (RR-HLCs) and primary hepatocytes/human tissue enabled identification of new molecular markers and disease signatures.

resultsOur studies showed that abnormal A1AT polymer processing (immobilised ER components, reduced luminal protein mobility and disrupted ER cisternae) occurred heterogeneously within hepatocyte populations and was associated with disrupted mitochondrial structure, presence of the oncogenic protein AKR1B10 and two upregulated molecular clusters centred on members of inflammatory (IL-18 and Caspase-4) and unfolded protein response (Calnexin and Calreticulin) pathways. These results were validated in a second patient-specific hiPSC line.

conclusionsOur data identified novel pathways that potentially link the expression of Z A1AT polymers to liver disease. These findings could help pave the way towards identification of new therapeutic targets for the treatment of A1ATD. LAY SUMMARY: This study compared the gene expression and protein profiles of healthy liver cells and those affected by the inherited disease α

Indexed as

alpha 1-Antitrypsinalpha 1-Antitrypsin DeficiencyCells, CulturedEndoplasmic ReticulumHepatocytesHumansInduced Pluripotent Stem CellsInflammationUnfolded Protein Responsealpha 1-AntitrypsinHepatocyteHuman-induced pluripotent stem cellInflammationInherited liver diseaseα(1)-Antitrypsin deficiency

Identifiers

PMID29879455
PMCPMC6562205
OpenAlexW2806638042

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.