Evidence map›Paper›PMID 29879147›Full record

ArticlePloS one2018

Interrogation of transcriptomic changes associated with drug-induced hepatic sinusoidal dilatation in colorectal cancer.

Monika A Jarzabek, William R Proctor, Jennifer Vogt, Rupal Desai, Patrick Dicker, Gary Cain, Rajiv Raja, Jens Brodbeck, Dale Stevens, Eric P van der Stok and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 2 countries.

Monika A JarzabekDepartment of Physiology and Medical Physics, Royal College of Surgeons in Ireland, Dublin, Ireland.ORCID 0000-0001-7008-4797
William R ProctorDepartment of Safety Assessment, Genentech Inc., South San Francisco, California, United States of America.
Jennifer VogtDepartment of Safety Assessment, Genentech Inc., South San Francisco, California, United States of America.
Rupal DesaiDepartment of Oncology Biomarker Development, Genentech Inc., South San Francisco, California, United States of America.
Patrick DickerDepartment of Epidemiology and Public Health Medicine, Royal College of Surgeons in Ireland, Dublin, Ireland.
Gary CainDepartment of Safety Assessment, Genentech Inc., South San Francisco, California, United States of America.
Rajiv RajaDepartment of Oncology Biomarker Development, Genentech Inc., South San Francisco, California, United States of America.
Jens BrodbeckDepartment of Safety Assessment, Genentech Inc., South San Francisco, California, United States of America.
Dale StevensDepartment of Safety Assessment, Genentech Inc., South San Francisco, California, United States of America.
Eric P van der StokDepartment of Surgical Oncology, Erasmus MC, Rotterdam, Netherlands.
John W M MartensDepartment of Medical Oncology, Erasmus MC, Rotterdam, Netherlands.
Cornelis VerhoefDepartment of Surgical Oncology, Erasmus MC, Rotterdam, Netherlands.
Priti S HegdeDepartment of Oncology Biomarker Development, Genentech Inc., South San Francisco, California, United States of America.
Annette T ByrneDepartment of Physiology and Medical Physics, Royal College of Surgeons in Ireland, Dublin, Ireland.
Jacqueline M TarrantDepartment of Safety Assessment, Genentech Inc., South San Francisco, California, United States of America.
Erasmus MC · NLRoyal College of Surgeons in Ireland · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drug-related sinusoidal dilatation (SD) is a common form of hepatotoxicity associated with oxaliplatin-based chemotherapy used prior to resection of colorectal liver metastases (CRLM). Recently, hepatic SD has also been associated with anti-delta like 4 (DLL4) cancer therapies targeting the NOTCH pathway. To investigate the hypothesis that NOTCH signaling plays an important role in drug-induced SD, gene expression changes were examined in livers from anti-DLL4 and oxaliplatin-induced SD in non-human primate (NHP) and patients, respectively. Putative mechanistic biomarkers of bevacizumab (bev)-mediated protection against oxaliplatin-induced SD were also investigated. RNA was extracted from whole liver sections or centrilobular regions by laser-capture microdissection (LCM) obtained from NHP administered anti-DLL4 fragment antigen-binding (F(ab')2 or patients with CRLM receiving oxaliplatin-based chemotherapy with or without bev. mRNA expression was quantified using high-throughput real-time quantitative PCR. Significance analysis was used to identify genes with differential expression patterns (false discovery rate (FDR) < 0.05). Eleven (CCL2, CCND1, EFNB2, ERG, ICAM1, IL16, LFNG, NOTCH1, NOTCH4, PRDX1, and TGFB1) and six (CDH5, EFNB2, HES1, IL16, MIK67, HES1 and VWF) candidate genes were differentially expressed in the liver of anti-DLL4- and oxaliplatin-induced SD, respectively. Addition of bev to oxaliplatin-based chemotherapy resulted in differential changes in hepatic CDH5, HEY1, IL16, JAG1, MMP9, NOTCH4 and TIMP1 expression. This work implicates NOTCH and IL16 pathways in the pathogenesis of drug-induced SD and further explains the hepato-protective effect of bev in oxaliplatin-induced SD observed in CRLM patients.

Indexed as

TranscriptomeAgedAnimalsAntineoplastic Combined Chemotherapy ProtocolsBiopsyCapillariesChemical and Drug Induced Liver InjuryColorectal NeoplasmsDilatation, PathologicFemaleGene Expression ProfilingHumansLiverLiver NeoplasmsMacaca fascicularisMaleOxaliplatin

Identifiers

PMID29879147
PMCPMC5991753
OpenAlexW2806384700

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.