Evidence map›Paper›PMID 29877797›Full record

ArticleeLife2018

Dynamic action of the Sec machinery during initiation, protein translocation and termination.

Tomas Fessl, Daniel Watkins, Peter Oatley, William John Allen, Robin Adam Corey, Jim Horne, Steve A Baldwin, Sheena E Radford, Ian Collinson, Roman Tuma

Abstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Bacterial motility depends on a critical flagellum length and energy-optimized assembly.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. Article
  3. The Multifunctional Preprotein Binding Domain of SecA.Chembiochem : a European journal of chemical biology · 2024
    Article
  4. SecYEG-mediated translocation in a model synthetic cell.Synthetic biology (Oxford, England) · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Cotranslational Biogenesis of Membrane Proteins in Bacteria.Frontiers in molecular biosciences · 2022
    Review
  13. Article
  14. Review
  15. The Dynamic SecYEG Translocon.Frontiers in molecular biosciences · 2021
    Review
  16. Refined measurement of SecA-driven protein secretion reveals that translocation is indirectly coupled to ATP turnover.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Tomas FesslAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds, United Kingdom.ORCID http://orcid.org/0000-0001-6969-4870
Daniel WatkinsSchool of Biochemistry, University of Bristol, Bristol, United Kingdom.ORCID http://orcid.org/0000-0003-3825-5036
Peter OatleyAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds, United Kingdom.ORCID http://orcid.org/0000-0001-7881-5590
William John AllenSchool of Biochemistry, University of Bristol, Bristol, United Kingdom.ORCID http://orcid.org/0000-0002-9513-4786
Robin Adam CoreySchool of Biochemistry, University of Bristol, Bristol, United Kingdom.ORCID http://orcid.org/0000-0003-1820-7993
Jim HorneAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds, United Kingdom.ORCID http://orcid.org/0000-0001-5260-2634
Steve A BaldwinAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds, United Kingdom.
Sheena E RadfordAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds, United Kingdom.ORCID http://orcid.org/0000-0002-3079-8039
Ian CollinsonSchool of Biochemistry, University of Bristol, Bristol, United Kingdom.ORCID https://orcid.org/0000-0002-3931-0503
Roman TumaAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds, United Kingdom.ORCID http://orcid.org/0000-0003-0047-0013

Funding

Biotechnology and Biological Sciences Research Council BB/I006737/1Biotechnology and Biological Sciences Research Council BB/I008675/1Biotechnology and Biological Sciences Research Council BB/M003604/IBiotechnology and Biological Sciences Research Council BB/M011151/1Biotechnology and Biological Sciences Research Council BB/N015126/1Biotechnology and Biological Sciences Research Council BB/N017307/1Biotechnology and Biological Sciences Research Council BBSRC South West Bioscience Doctoral Training PartnershipWellcome TrustWellcome Trust 104632
6 · The paper itself

Abstract

Protein translocation across cell membranes is a ubiquitous process required for protein secretion and membrane protein insertion. In bacteria, this is mostly mediated by the conserved SecYEG complex, driven through rounds of ATP hydrolysis by the cytoplasmic SecA, and the trans-membrane proton motive force. We have used single molecule techniques to explore SecY pore dynamics on multiple timescales in order to dissect the complex reaction pathway. The results show that SecA, both the signal sequence and mature components of the pre-protein, and ATP hydrolysis each have important and specific roles in channel unlocking, opening and priming for transport. After channel opening, translocation proceeds in two phases: a slow phase independent of substrate length, and a length-dependent transport phase with an intrinsic translocation rate of ~40 amino acids per second for the proOmpA substrate. Broad translocation rate distributions reflect the stochastic nature of polypeptide transport.

Indexed as

Proton-Motive ForceAdenosine TriphosphatasesAdenosine TriphosphateBacterial ProteinsCell MembraneEscherichia coliEscherichia coli ProteinsHydrolysisMicroscopy, FluorescenceModels, MolecularMutationProtein ConformationProtein Sorting SignalsProtein TransportSecA ProteinsSEC Translocation ChannelsAdenosine TriphosphatasesAdenosine TriphosphateBacterial ProteinsEscherichia coli ProteinsProtein Sorting SignalsSecA ProteinsSEC Translocation ChannelsE. colifluorescencekineticsmolecular biophysicsSecASecYEGsingle moleculestochasticstructural biology

Identifiers

PMID29877797
PMCPMC6021171

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.