ArticleThe ISME journal2018
Inter-individual variability in copepod microbiomes reveals bacterial networks linked to host physiology.
Article in The ISME journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.
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Who cites it
20 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Meta-analysis cum machine learning approaches address the structure and biogeochemical potential of marine copepod associated bacteriobiomes.Scientific reports · 2021Pooled it
- Sea Lice (Lepeophtheirus salmonis) Harbour Putative Fish Pathogens: Insights From Illumina and Nanopore Sequencing.Journal of fish diseases · 2026Article
- Crosstalk in the cold: host-microbe interactions in insect diapause.Annals of the Entomological Society of America · 2026Review
- Fungi Associated With Freshwater Zooplankton Are Taxon-Specific, Temporally Dynamic and Reflect Allochthonous Inputs.Molecular ecology · 2026Article
- Zooplankton-associated Bacterial Communities are Dominated by Host-Specific Rather than Environmentally Random Taxa.Microbial ecology · 2026Article
- Pelagic Shuttles of Antibiotic Resistance Genes: Zooplankton as Overlooked Vectors Across Space and Food Webs.Microbial ecology · 2025Review
- Collaborative metabolic curation of an emerging model marine bacterium, Alteromonas macleodii ATCC 27126.PloS one · 2025Article
- Habitat specificity modulates the bacterial biogeographic patterns in the Southern Ocean.FEMS microbiology ecology · 2024Article
- Article
- Chitin utilization by marine picocyanobacteria and the evolution of a planktonic lifestyle.Proceedings of the National Academy of Sciences of the United States of America · 2023Article
- Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus againstApplied and environmental microbiology · 2023Article
- Reshuffling of the Coral Microbiome during Dormancy.Applied and environmental microbiology · 2022Article
- Intrahabitat Differences in Bacterial Communities Associated withApplied and environmental microbiology · 2022Article
- Host genotype structures the microbiome of a globally dispersed marine phytoplankton.Proceedings of the National Academy of Sciences of the United States of America · 2021Article
- Microbiome reduction prevents lipid accumulation during early diapause in the northern house mosquito, Culex pipiens pipiens.Journal of insect physiology · 2021Article
- Application of Next-Generation Sequencing for the Determination of the Bacterial Community in the Gut Contents of Brackish Copepod Species (Animals : an open access journal from MDPI · 2021Article
- Structure and predictive metabolic contribution of intestinal microbiota of Longfin yellowtail (Seriola rivoliana) juveniles in aquaculture systems.Molecular biology reports · 2020Article
- Copepod-Associated Gammaproteobacterial Alkaline Phosphatases in the North Atlantic Subtropical Gyre.Frontiers in microbiology · 2020Article
- Hydrostatic pressure impedes the degradation of sinking copepod carcasses and fecal pellets.Journal of plankton researchArticle
- Long Term Copepod Culture Houses a Rich Microbial Eukaryotic Community Including New and Known Symbionts.The Journal of eukaryotic microbiologyArticle
Corrections and comments
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Authors and funding
6 authors.
Funding
Abstract
Copepods harbor diverse bacterial communities, which collectively carry out key biogeochemical transformations in the ocean. However, bulk copepod sampling averages over the variability in their associated bacterial communities, thereby limiting our understanding of the nature and specificity of copepod-bacteria associations. Here, we characterize the bacterial communities associated with nearly 200 individual Calanus finmarchicus copepods transitioning from active growth to diapause. We find that all individual copepods sampled share a small set of "core" operational taxonomic units (OTUs), a subset of which have also been found associated with other marine copepod species in different geographic locations. However, most OTUs are patchily distributed across individual copepods, thereby driving community differences across individuals. Among patchily distributed OTUs, we identified groups of OTUs correlated with common ecological drivers. For instance, a group of OTUs positively correlated with recent copepod feeding served to differentiate largely active growing copepods from those entering diapause. Together, our results underscore the power of individual-level sampling for understanding host-microbiome relationships.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.