Evidence map›Paper›PMID 29872006›Full record

ReviewActa crystallographica. Section D, Structural biology2018

Approaches to altering particle distributions in cryo-electron microscopy sample preparation.

Ieva Drulyte, Rachel M Johnson, Emma L Hesketh, Daniel L Hurdiss, Charlotte A Scarff, Sebastian A Porav, Neil A Ranson, Stephen P Muench, Rebecca F Thompson

Abstract readReview
In one paragraph

Review in Acta crystallographica. Section D, Structural biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed.

  1. UsingbioRxiv : the preprint server for biology · 2026
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  17. Factors affecting macromolecule orientations in thin films formed in cryo-EM.Acta crystallographica. Section D, Structural biology · 2024
    Article
  18. Review
  19. Article
  20. Article

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ieva DrulyteSchool of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, England.ORCID 0000-0003-1117-7699
Rachel M JohnsonSchool of Biomedical Sciences, Faculty of Biological Sciences and Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, England.ORCID 0000-0002-5363-837X
Emma L HeskethSchool of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, England.ORCID 0000-0002-4522-0061
Daniel L HurdissSchool of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, England.ORCID 0000-0003-3834-5808
Charlotte A ScarffSchool of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, England.ORCID 0000-0001-6168-0060
Sebastian A PoravNational Institute for Research and Development of Isotopic and Molecular Technologies, 67-103 Donat, 400293 Cluj-Napoca, Romania.
Neil A RansonSchool of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, England.ORCID 0000-0002-3640-5275
Stephen P MuenchSchool of Biomedical Sciences, Faculty of Biological Sciences and Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, England.ORCID 0000-0001-6869-4414
Rebecca F ThompsonSchool of Molecular and Cellular Biology, Faculty of Biological Sciences and Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, England.ORCID 0000-0002-4254-8854

Funding

Biotechnology and Biological Sciences Research Council BB/L020955/1Wellcome Trust 090932Wellcome Trust 090932/Z/09/ZWellcome Trust 102572/B/13/ZWellcome Trust 105214/Z/14/ZWellcome Trust 108466Wellcome Trust 108466/Z/15/ZWellcome Trust 109158/B/15/Z
6 · The paper itself

Abstract

Cryo-electron microscopy (cryo-EM) can now be used to determine high-resolution structural information on a diverse range of biological specimens. Recent advances have been driven primarily by developments in microscopes and detectors, and through advances in image-processing software. However, for many single-particle cryo-EM projects, major bottlenecks currently remain at the sample-preparation stage; obtaining cryo-EM grids of sufficient quality for high-resolution single-particle analysis can require the careful optimization of many variables. Common hurdles to overcome include problems associated with the sample itself (buffer components, labile complexes), sample distribution (obtaining the correct concentration, affinity for the support film), preferred orientation, and poor reproducibility of the grid-making process within and between batches. This review outlines a number of methodologies used within the electron-microscopy community to address these challenges, providing a range of approaches which may aid in obtaining optimal grids for high-resolution data collection.

Indexed as

Cryoelectron MicroscopyMacromolecular SubstancesSpecimen HandlingMacromolecular Substancescryo-electron microscopysingle-particle analysissingle-particle sample preparation

Identifiers

PMID29872006
PMCPMC6096488

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.