ArticleScientific data2018
Global gene expression profiling for fruit organs and pathogen infections in the pepper, Capsicum annuum L.
Article in Scientific data, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed, 60 citations in OpenAlex.
- Optimizing prochloraz timing for curative control of Fusarium wilt in chili: a multi-target strategy targeting early root infection.Pest management science · 2026Article
- An Immunochromatographic Test Strip and Its Application in Rapid Screening of Pepper Mild Mottle Virus.Biosensors · 2026Article
- The transcriptional analysis of pepper shed light on a proviral role of light-harvesting chlorophyll a/b binding protein 13 during infection of pepper mild mottle virus.Frontiers in plant science · 2025Article
- An improved bacterial mRNA enrichment strategy in dual RNA sequencing to unveil the dynamics of plant-bacterial interactions.Plant methods · 2024Article
- The landscape of abiotic and biotic stress-responsive splice variants with deep RNA-seq datasets in hot pepper.Scientific data · 2024Article
- Red light induces salicylic acid accumulation by activating CaHY5 to enhance pepper resistance againstHorticulture research · 2023Article
- Nucleotide-binding leucine-rich repeat network underlies nonhost resistance of pepper against the Irish potato famine pathogen Phytophthora infestans.Plant biotechnology journal · 2023Article
- Transcriptome profiling of pepper leaves by RNA-Seq during an incompatible and a compatible pepper-tobamovirus interaction.Scientific reports · 2021Article
- Review
- Comparative analysis of de novo genomes reveals dynamic intra-species divergence of NLRs in pepper.BMC plant biology · 2021Article
- The dissection of R genes and locus Pc5.1 in Phytophthora capsici infection provides a novel view of disease resistance in peppers.BMC genomics · 2021Article
- Transcriptomic and functional analyses reveal an antiviral role of autophagy during pepper mild mottle virus infection.BMC plant biology · 2020Article
- Comprehensive transcriptome resource for response to phytohormone-induced signaling in Capsicum annuum L.BMC research notes · 2020Article
- Capsidiol-related genes are highly expressed in response to Colletotrichum scovillei during Capsicum annuum fruit development stages.Scientific reports · 2020Article
- Transcriptome profiling of abiotic responses to heat, cold, salt, and osmotic stress of Capsicum annuum L.Scientific data · 2020Article
Corrections and comments
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Authors and funding
12 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Hot pepper (Capsicum annuum) is one of the most consumed vegetable crops in the world and useful to human as it has many nutritional and medicinal values. Genomic resources of pepper are publically available since the pepper genomes have been completed and massive data such as transcriptomes have been deposited. Nevertheless, global transcriptome profiling is needed to identify molecular mechanisms related to agronomic traits in pepper, but limited analyses are published. Here, we report the comprehensive analysis of pepper transcriptomes during fruit ripening and pathogen infection. For the ripening, transcriptome data were obtained from placenta and pericarp at seven developmental stages. To reveal global transcriptomic landscapes during infection, leaves at six time points post-infection by one of three pathogens (Phytophthora infestans, Pepper mottle virus, and Tobacco mosaic virus P0 strain) were profiled. The massive parallel transcriptome profiling in this study will serve as a valuable resource for detection of molecular networks of fruit development and disease resistance in Capsicum annuum.
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