Evidence map›Paper›PMID 29870016›Full record

ArticleActa crystallographica. Section F, Structural biology communications2018

Crystal structure of an inactive variant of the quorum-sensing master regulator HapR from the protease-deficient non-O1, non-O139 Vibrio cholerae strain V2.

Justin Cruite, Patrick Succo, Saumya Raychaudhuri, F Jon Kull

Abstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Structural Insights into Regulation of Vibrio Virulence Gene Networks.Advances in experimental medicine and biology · 2023
    Article
  3. Sequence Polymorphisms inApplied and environmental microbiology · 2022
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Justin CruiteDepartment of Biochemistry, Geisel School of Medicine, Dartmouth College, Hanover, New Hampshire, USA.
Patrick SuccoCollege of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, Colorado, USA.
Saumya RaychaudhuriInstitute of Microbial Technology, Chandigarh, Council of Scientific and Industrial Research, Chandigarh 160 036, India.
F Jon KullDepartment of Biochemistry, Geisel School of Medicine, Dartmouth College, Hanover, New Hampshire, USA.

Funding

HOST-MICROBE INTERACTIONST32AI007519 · NIAID · DARTMOUTH COLLEGE · PI DEBORAH A HOGAN · 1997 to 2026
$5.9M
Structural Analysis of Vibrio cholerae Virulence Gene Regulatory ProteinsR01AI072661 · NIAID · DARTMOUTH COLLEGE · PI KULL, FREDRICK JON · 2007 to 2016
$4.3M
NIAID NIH HHS R01 AI072661NIAID NIH HHS T32 AI007519NIH HHS R01-AI072661
6 · The paper itself

Abstract

HapR is a TetR-family transcriptional regulator that controls quorum sensing in Vibrio cholerae, the causative agent of cholera. HapR regulates the expression of hemagglutinin protease, virulence and biofilm genes. The crystal structure of wild-type HapR from V. cholerae strain O1 El Tor C6706 has previously been solved. In this study, the structure of a DNA-binding-deficient variant of HapR (HapR

Indexed as

CrystallizationPeptide HydrolasesProtein Structure, SecondaryProtein Structure, TertiaryQuorum SensingRegulatory Elements, TranscriptionalVibrio choleraeX-Ray DiffractionPeptide HydrolasesHapRquorum sensingTetR transcriptional regulatorVibrio cholerae

Identifiers

PMID29870016
PMCPMC5987740

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.