Evidence map›Paper›PMID 29868450›Full record

ArticleNeuroImage. Clinical2018

Regional expression of genes mediating trans-synaptic alpha-synuclein transfer predicts regional atrophy in Parkinson disease.

Benjamin Freeze, Diana Acosta, Sneha Pandya, Yize Zhao, Ashish Raj

Open access · goldAbstract read
In one paragraph

Article in NeuroImage. Clinical, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 54 citations in OpenAlex.

  1. Review
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  11. The Interplay between α-Synuclein and Microglia in α-Synucleinopathies.International journal of molecular sciences · 2023
    Review
  12. Article
  13. Review
  14. Article
  15. Association between LAG3/CD4 gene variants and risk of Parkinson's disease.European journal of clinical investigation · 2022
    Article
  16. Imaging Transcriptomics of Brain Disorders.Biological psychiatry global open science · 2022
    Review
  17. Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Benjamin FreezeDepartment of Radiology, NewYork-Presbyterian Hospital/Weill Cornell Medicine, United States. Electronic address: bef9037@nyp.org.
Diana AcostaDepartment of Radiology, NewYork-Presbyterian Hospital/Weill Cornell Medicine, United States.
Sneha PandyaDepartment of Radiology, NewYork-Presbyterian Hospital/Weill Cornell Medicine, United States.
Yize ZhaoDivision of Biostatistics and Epidemiology, Department of Healthcare Policy and Research, Weill Cornell Medicine, United States.
Ashish RajDepartment of Radiology, NewYork-Presbyterian Hospital/Weill Cornell Medicine, United States; Department of Radiology, University of California, San Francisco, United States.
Presbyterian Hospital · USWeill Cornell Medicine · USNewYork–Presbyterian Hospital · US

Funding

Predictive model of spread of Parkinson's pathology using network diffusionR01NS092802 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI GUPTA, AJAY, RAJ, ASHISH · 2016 to 2020
$2.8M
NINDS NIH HHS R01 NS092802
6 · The paper itself

Abstract

Multiple genes have been implicated in Parkinson disease pathogenesis, but the relationship between regional expression of these genes and regional dysfunction across the brain is unknown. We address this question by joint analysis of high resolution magnetic resonance imaging data from the Parkinson's Progression Markers Initiative and regional genetic microarray expression data from the Allen Brain Atlas. Regional brain atrophy and genetic expression was co-registered to a common 86 region brain atlas and robust multivariable regression analysis was performed to identify genetic predictors of regional brain atrophy. Top candidate genes from GWAS analysis, as well as genes implicated in trans-synaptic alpha-synuclein transfer and autosomal recessive PD were included in our analysis. We identify three genes with expression patterns that are highly significant predictors of regional brain atrophy. The two most significant predictors are LAG3 and RAB5A, genes implicated in trans-synaptic synuclein transfer. Other well-validated PD-related genes do not have expression patterns that predict regional atrophy, suggesting that they may serve other roles such as disease initiation factors.

Indexed as

alpha-SynucleinAntigens, CDAtrophyBrainBrain MappingCorrelation of DataDisease ProgressionFemaleGene Expression RegulationGenetic TestingHumansImage Processing, Computer-AssistedLymphocyte Activation Gene 3 ProteinMagnetic Resonance ImagingMaleParkinson Diseasealpha-SynucleinAntigens, CDLag3 protein, humanLymphocyte Activation Gene 3 Proteinrab5 GTP-Binding ProteinsAlpha-synucleinAtrophyGenetic analysisLAG3Parkinson diseaseTrans-synaptic spread

Identifiers

PMID29868450
PMCPMC5984599
OpenAlexW2792565280

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.