Evidence map›Paper›PMID 29866182›Full record

ArticleEpigenetics & chromatin2018

RNAi-dependent heterochromatin assembly in fission yeast Schizosaccharomyces pombe requires heat-shock molecular chaperones Hsp90 and Mas5.

Kosuke Okazaki, Hiroaki Kato, Tetsushi Iida, Kaori Shinmyozu, Jun-Ichi Nakayama, Yota Murakami, Takeshi Urano

Open access · goldAbstract read
In one paragraph

Article in Epigenetics & chromatin, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Polycomb RequiresFrontiers in cell and developmental biology · 2021
    Article
  7. Article
  8. The Nuclear and DNA-Associated Molecular Chaperone Network.Cold Spring Harbor perspectives in biology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Kosuke OkazakiDepartment of Biochemistry, Shimane University School of Medicine, 89-1 Enya-cho, Izumo, Shimane, 693-8501, Japan.
Hiroaki KatoDepartment of Biochemistry, Shimane University School of Medicine, 89-1 Enya-cho, Izumo, Shimane, 693-8501, Japan. hkato@med.shimane-u.ac.jp.ORCID 0000-0001-9591-1875
Tetsushi IidaDivision of Cytogenetics, National Institute of Genetics, Mishima, 1111 Yata, Mishima, 411-8540, Japan.
Kaori ShinmyozuProteomics Support Unit, RIKEN Center for Developmental Biology, Kobe, Hyogo, 650-0047, Japan.
Jun-Ichi NakayamaDivision of Chromatin Regulation, National Institute for Basic Biology, Okazaki, Aichi, 444-8585, Japan.
Yota MurakamiDepartment of Chemistry, Faculty of Science, Hokkaido University, Sapporo, Hokkaido, 060-0810, Japan.
Takeshi UranoDepartment of Biochemistry, Shimane University School of Medicine, 89-1 Enya-cho, Izumo, Shimane, 693-8501, Japan.
Shimane University · JPHokkaido University · JPNational Cerebral and Cardiovascular Center · JPNational Institute for Basic Biology · JPNational Institute of Genetics · JP

Funding

Japan Society for the Promotion of Science 13J07740Japan Society for the Promotion of Science JP26116513
6 · The paper itself

Abstract

backgroundHeat-shock molecular chaperone proteins (Hsps) promote the loading of small interfering RNA (siRNA) onto RNA interference (RNAi) effector complexes. While the RNAi process is coupled with heterochromatin assembly in several model organisms, it remains unclear whether the Hsps contribute to epigenetic gene regulation. In this study, we used the fission yeast Schizosaccharomyces pombe as a model organism and investigated the roles of Hsp90 and Mas5 (a nucleocytoplasmic type-I Hsp40 protein) in RNAi-dependent heterochromatin assembly.

resultsUsing a genetic screen and biochemical analyses, we identified Hsp90 and Mas5 as novel silencing factors. Mutations in the genes encoding these factors caused derepression of silencing at the pericentromere, where heterochromatin is assembled in an RNAi-dependent manner, but not at the subtelomere, where RNAi is dispensable. The mutations also caused a substantial reduction in the level of dimethylation of histone H3 at Lys9 at the pericentromere, where association of the Argonaute protein Ago1 was also abrogated. Consistently, siRNA corresponding to the pericentromeric repeats was undetectable in these mutant cells. In addition, levels of Tas3, which is a protein in the RNA-induced transcriptional silencing complex along with Ago1, were reduced in the absence of Mas5.

conclusionsOur results suggest that the Hsps Hsp90 and Mas5 contribute to RNAi-dependent heterochromatin assembly. In particular, Mas5 appears to be required to stabilize Tas3 in vivo. We infer that impairment of Hsp90 and Hsp40 also may affect the integrity of the epigenome in other organisms.

Indexed as

Argonaute ProteinsCarrier ProteinsCentromereChromatin Assembly and DisassemblyEpigenesis, GeneticGene Expression Regulation, FungalHeterochromatinHSP40 Heat-Shock ProteinsHSP90 Heat-Shock ProteinsMethylationMutationRNA, Small InterferingSchizosaccharomycesSchizosaccharomyces pombe ProteinsArgonaute ProteinsCarrier ProteinsHeterochromatinHSP40 Heat-Shock ProteinsHSP90 Heat-Shock ProteinsRNA, Small InterferingSchizosaccharomyces pombe ProteinsTas3 protein, S pombeFission yeastHeat-shock molecular chaperonsHeterochromatinHsp90Mas5RNAiSchizosaccharomyces pombe

Identifiers

PMID29866182
PMCPMC5985592
OpenAlexW2807280589

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.