Evidence map›Paper›PMID 29866136›Full record

ArticleMolecular brain2018

Excitation wavelength optimization improves photostability of ASAP-family GEVIs.

Fang Xu, Dong-Qing Shi, Pak-Ming Lau, Michael Z Lin, Guo-Qiang Bi

Abstract read
In one paragraph

Article in Molecular brain, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Photoswitching alters fluorescence readout of jGCaMP8 CaProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Fang XuCAS Key Laboratory of Brain Function and Disease, and School of Life Sciences, University of Science and Technology of China, Hefei, China.
Dong-Qing ShiHefei National Laboratory for Physical Sciences at the Microscale, CAS Center for Excellence in Brain Science and Intelligence Technology, and School of Life Sciences, University of Science and Technology of China, Hefei, China.
Pak-Ming LauCAS Key Laboratory of Brain Function and Disease, and School of Life Sciences, University of Science and Technology of China, Hefei, China.
Michael Z LinDepartments of Neurobiology, Bioengineering and Pediatrics, Stanford University, Stanford, CA, 94305, USA. mzlin@stanford.edu.
Guo-Qiang BiHefei National Laboratory for Physical Sciences at the Microscale, CAS Center for Excellence in Brain Science and Intelligence Technology, and School of Life Sciences, University of Science and Technology of China, Hefei, China. gqbi@ustc.edu.cn.

Funding

TRAINING & OUTREACH COREP50GM107615 · NIGMS · STANFORD UNIVERSITY · PI FERRELL, JAMES E. · 2013 to 2017
$10.9M
CAS XDB02050000National Natural Science Foundation of China 31630030NIGMS NIH HHS P50 GM107615
6 · The paper itself

Abstract

Recent interest in high-throughput recording of neuronal activity has motivated rapid improvements in genetically encoded calcium or voltage indicators (GECIs or GEVIs) for all-optical electrophysiology. Among these probes, the ASAPs, a series of voltage indicators based on a variant of circularly permuted green fluorescent protein (cpGFP) and a conjugated voltage sensitive domain (VSD), are capable of detecting both action potentials and subthreshold neuronal activities. Here we show that the ASAPs, when excited by blue light, undergo reversible photobleaching. We find that this fluorescence loss induced by excitation with 470-nm light can be substantially reversed by low-intensity 405-nm light. We demonstrate that 405-nm and 470-nm co-illumination significantly improved brightness and thereby signal-to-noise ratios during voltage imaging compared to 470-nm illumination alone. Illumination with a single wavelength of 440-nm light also produced similar improvements. We hypothesize that reversible photobleaching is related to cis-trans isomerization and protonation of the GFP chromophore of ASAP proteins. Amino acids that influence chromophore isomerization are potential targets of point mutations for future improvements.

Indexed as

LightGreen Fluorescent ProteinsHEK293 CellsHumansMolecular ProbesMutationOptogeneticsGreen Fluorescent ProteinsMolecular ProbesASAPGenetically encoded voltage indicatorGEVIPhotostabilityPhotoswitching

Identifiers

PMID29866136
PMCPMC5987426

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.