Evidence map›Paper›PMID 29862813›Full record

ArticleJournal of the American Chemical Society2018

Enzyme Architecture: Amino Acid Side-Chains That Function To Optimize the Basicity of the Active Site Glutamate of Triosephosphate Isomerase.

Xiang Zhai, Christopher J Reinhardt, M Merced Malabanan, Tina L Amyes, John P Richard

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Capturing the free energy of transition state stabilization: insights from the inhibition of mandelate racemase.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. How enzymes harness highly unfavorable proton transfer reactions.Protein science : a publication of the Protein Society · 2021
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Protein Flexibility and Stiffness Enable Efficient Enzymatic Catalysis.Journal of the American Chemical Society · 2019
    Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Xiang ZhaiDepartment of Chemistry , University at Buffalo, SUNY , Buffalo , New York 14260-3000 United States.
Christopher J ReinhardtDepartment of Chemistry , University of Illinois at Urbana-Champaign , 600 S Mathews Avenue , Urbana , Illinois 61801 , United States.ORCID 0000-0001-9992-1253
M Merced MalabananDepartment of Biochemistry , Vanderbilt University , 842 Robinson Research Building , Nashville , Tennessee 37205 , United States.
Tina L AmyesDepartment of Chemistry , University at Buffalo, SUNY , Buffalo , New York 14260-3000 United States.
John P RichardDepartment of Chemistry , University at Buffalo, SUNY , Buffalo , New York 14260-3000 United States.ORCID 0000-0002-0440-2387
University at Buffalo, State University of New York · USUniversity of Illinois Urbana-Champaign · USVanderbilt University · US

Funding

REACTIVE INTERMEDIATES OF ENZYMATIC REACTIONSR01GM039754 · NIGMS · UNIVERSITY OF KENTUCKY · PI RICHARD, JOHN P · 1993 to 2012
$3.9M
Activation of Enzymes for Catalysis: The Role of Substrate-Induced Structural ChangesR01GM116921 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI RICHARD, JOHN P · 2016 to 2019
$1.3M
NIGMS NIH HHS R01 GM039754NIGMS NIH HHS R01 GM116921
6 · The paper itself

Abstract

We report pH rate profiles for k

Indexed as

Amino AcidsCatalytic DomainCrystallography, X-RayGlutamic AcidHydrogen-Ion ConcentrationModels, MolecularMolecular StructureTriose-Phosphate IsomeraseAmino AcidsGlutamic AcidTriose-Phosphate Isomerase

Identifiers

PMID29862813
PMCPMC6037162
OpenAlexW2807437747

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.