Evidence map›Paper›PMID 29862127›Full record

ArticleJournal of pathology informatics2018

Convolutional Deep Belief Network with Feature Encoding for Classification of Neuroblastoma Histological Images.

Soheila Gheisari, Daniel R Catchpoole, Amanda Charlton, Paul J Kennedy

Abstract read
In one paragraph

Article in Journal of pathology informatics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  15. Implementing the DICOM Standard for Digital Pathology.Journal of pathology informatics · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Soheila GheisariCentre for Artificial Intelligence, Faculty of Engineering and Information Technology, University of Technology Sydney, NSW, Australia.
Daniel R CatchpooleThe Tumour Bank, The Children's Cancer Research Unit, The Kids Research Institute, The Children's Hospital at Westmead, Locked Bag 4001 Westmead, NSW, Australia.
Amanda CharltonLabPLUS, Department of Histopathology, Auckland District Health Board, Auckland City Hospital, Grafton, Auckland.
Paul J KennedyCentre for Artificial Intelligence, Faculty of Engineering and Information Technology, University of Technology Sydney, NSW, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNeuroblastoma is the most common extracranial solid tumor in children younger than 5 years old. Optimal management of neuroblastic tumors depends on many factors including histopathological classification. The gold standard for classification of neuroblastoma histological images is visual microscopic assessment. In this study, we propose and evaluate a deep learning approach to classify high-resolution digital images of neuroblastoma histology into five different classes determined by the Shimada classification. SUBJECTS AND

methodsWe apply a combination of convolutional deep belief network (CDBN) with feature encoding algorithm that automatically classifies digital images of neuroblastoma histology into five different classes. We design a three-layer CDBN to extract high-level features from neuroblastoma histological images and combine with a feature encoding model to extract features that are highly discriminative in the classification task. The extracted features are classified into five different classes using a support vector machine classifier. DATA: We constructed a dataset of 1043 neuroblastoma histological images derived from Aperio scanner from 125 patients representing different classes of neuroblastoma tumors.

resultsThe weighted average F-measure of 86.01% was obtained from the selected high-level features, outperforming state-of-the-art methods.

conclusionThe proposed computer-aided classification system, which uses the combination of deep architecture and feature encoding to learn high-level features, is highly effective in the classification of neuroblastoma histological images.

Indexed as

Convolutional deep belief networkfeature encodinghistological imagesneuroblastoma

Identifiers

PMID29862127
PMCPMC5952548

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.