Evidence map›Paper›PMID 29861285›Full record

ArticleNeuron2018

A Combination of Ontogeny and CNS Environment Establishes Microglial Identity.

F Chris Bennett, Mariko L Bennett, Fazeela Yaqoob, Sara B Mulinyawe, Gerald A Grant, Melanie Hayden Gephart, Edward D Plowey, Ben A Barres

Abstract read
In one paragraph

Article in Neuron, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 302 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
302citing papers in PubMed, 1 pooled it
26.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

302 citing papers in PubMed, 1 synthesis or guideline pooled it, 518 citations in OpenAlex.

  1. Pooled it
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  19. Microglial HVCN1 Deficiency Improves Movement and Survival of SOD1Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  20. Article

242 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

F Chris BennettDepartment of Neurobiology, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address: eph.bennett@gmail.com.
Mariko L BennettDepartment of Neurobiology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Fazeela YaqoobDepartment of Neurobiology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Sara B MulinyaweDepartment of Neurobiology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Gerald A GrantDepartment of Neurosurgery, Stanford University School of Medicine, Stanford, CA 94305, USA.
Melanie Hayden GephartDepartment of Neurosurgery, Stanford University School of Medicine, Stanford, CA 94305, USA.
Edward D PloweyDepartment of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Ben A BarresDepartment of Neurobiology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Stanford University · US

Funding

A BIOBEHAVIORAL RESEARCH TRAINING PROGRAMT32MH019938 · NIMH · STANFORD UNIVERSITY · PI Corey J Keller, RACHEL MANBER · 1994 to 2026
$9.4M
Working Memory in Parkinson Disease: A Cognitive & Systems Neuroscience ApproachP50AG047366 · NIA · STANFORD UNIVERSITY · PI HENDERSON, VICTOR · 2015 to 2019
$7.9M
VECTOR COREP30NS069375 · NINDS · STANFORD UNIVERSITY · PI STEINBERG, GARY K · 2011 to 2019
$6.3M
The Role of Glia in the Formation of Functional SynapsesR01DA015043 · NIDA · STANFORD UNIVERSITY · PI SCHERRER, GREGORY · 2001 to 2018
$3.9M
The Role of Glia in the Formation of Functional SynapsesR37DA015043 · NIDA · STANFORD UNIVERSITY · PI BARRES, BEN A · 2012 to 2017
$2.3M
(PQ1) Identifying and targeting human glioblastoma migrating in the peritumoral nicheR01CA216054 · NCI · STANFORD UNIVERSITY · PI HAYDEN GEPHART, MELANIE · 2017 to 2021
$1.7M
Creation of new tools to study human microglia using blood cellsK08MH112120 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI BENNETT, FREDERICK · 2016 to 2021
$1.0M
Tumor DNA in CSF and novel modeling decode breast cancer - brain metastasesK08NS091527 · NINDS · STANFORD UNIVERSITY · PI HAYDEN GEPHART, MELANIE · 2016 to 2020
$928k
NMDA receptor trafficking by the autophagy regulatory protein beclin 1K08NS085324 · NINDS · STANFORD UNIVERSITY · PI PLOWEY, EDWARD D · 2014 to 2017
$717k
Modulation of the Blood-Tumor Barrier Through Targeted Suppression of Claudin 5K08NS075144 · NINDS · STANFORD UNIVERSITY · PI GRANT, GERALD ARTHUR · 2011 to 2015
$641k
Four Laser, 18 Color Cell Sorter in the SSFFS10RR025518 · NCRR · STANFORD UNIVERSITY · PI HERZENBERG, LEONARD A · 2009 to 2009
$500k
What do microglia do? Dissecting their function in CNS health and diseaseF31NS078813 · NINDS · STANFORD UNIVERSITY · PI BENNETT, MARIKO L. · 2012 to 2015
$112k
NCI NIH HHS R01 CA216054NCRR NIH HHS S10 RR025518NIA NIH HHS P50 AG047366NIDA NIH HHS R01 DA015043NIDA NIH HHS R37 DA015043NIMH NIH HHS K08 MH112120NIMH NIH HHS L30 MH108106NIMH NIH HHS T32 MH019938NINDS NIH HHS F31 NS078813NINDS NIH HHS K08 NS075144NINDS NIH HHS K08 NS085324NINDS NIH HHS K08 NS091527NINDS NIH HHS P30 NS069375
6 · The paper itself

Abstract

Microglia, the brain's resident macrophages, are dynamic CNS custodians with surprising origins in the extra-embryonic yolk sac. The consequences of their distinct ontogeny are unknown but critical to understanding and treating brain diseases. We created a brain macrophage transplantation system to disentangle how environment and ontogeny specify microglial identity. We find that donor cells extensively engraft in the CNS of microglia-deficient mice, and even after exposure to a cell culture environment, microglia fully regain their identity when returned to the CNS. Though transplanted macrophages from multiple tissues can express microglial genes in the brain, only those of yolk-sac origin fully attain microglial identity. Transplanted macrophages of inappropriate origin, including primary human cells in a humanized host, express disease-associated genes and specific ontogeny markers. Through brain macrophage transplantation, we discover new principles of microglial identity that have broad applications to the study of disease and development of myeloid cell therapies.

Indexed as

Cell LineageAnimalsBrainCentral Nervous SystemHematopoietic Stem CellsHumansMacrophagesMiceMice, KnockoutMicrogliaReceptors, Granulocyte-Macrophage Colony-Stimulating FactorCsf1r protein, mouseReceptors, Granulocyte-Macrophage Colony-Stimulating Factorbrain macrophageCsf1rglial biologymicroglianeuroimmunityontogenyTmem119transplantation

Identifiers

PMID29861285
PMCPMC6023731
OpenAlexW2807609377

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.