Evidence map›Paper›PMID 29860511›Full record

ArticleJournal of experimental botany2018

Unraveling the induction of phytoene synthase 2 expression by salt stress and abscisic acid in Daucus carota.

Kevin Simpson, Paulina Fuentes, Luis Felipe Quiroz-Iturra, Carlos Flores-Ortiz, Rodrigo Contreras, Michael Handford, Claudia Stange

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 72 citations in OpenAlex.

  1. Molecular Dissection of theInternational journal of molecular sciences · 2026
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  13. PutativePlants (Basel, Switzerland) · 2023
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  15. The Carrot Phytoene Synthase 2 (Plants (Basel, Switzerland) · 2023
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  16. Article
  17. Embryogenic Stem Cell Identity after Protoplast Isolation fromInternational journal of molecular sciences · 2022
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Kevin SimpsonLaboratorio de Biología Molecular Vegetal, Departamento de Biología, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Santiago, Chile.
Paulina FuentesLaboratorio de Biología Molecular Vegetal, Departamento de Biología, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Santiago, Chile.
Luis Felipe Quiroz-IturraLaboratorio de Biología Molecular Vegetal, Departamento de Biología, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Santiago, Chile.
Carlos Flores-OrtizLaboratorio de Biología Molecular Vegetal, Departamento de Biología, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Santiago, Chile.
Rodrigo ContrerasLaboratorio de Fisiología y Biotecnología Vegetal, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile.
Michael HandfordLaboratorio de Biología Molecular Vegetal, Departamento de Biología, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Santiago, Chile.
Claudia StangeLaboratorio de Biología Molecular Vegetal, Departamento de Biología, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Santiago, Chile.
University of Chile · CLUniversidad de Santiago de Chile · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phytoene synthase (PSY) is the first committed enzyme of the carotenoid biosynthesis pathway and the most important point of regulation. Carotenoids are precursors of abscisic acid (ABA), which mediates abiotic stress tolerance responses in plants. ABA activates the synthesis of its own precursors through induction of PSY expression. Carrot, a species that accumulates very high amounts of carotenoids in its reserve root, has two PSY paralog genes that are expressed differentially in the root. Here, we determined that DcPSY2 expression is induced by salt stress and ABA. A DcPSY2 promoter fragment was obtained and characterized. Bioinformatic analysis showed the presence of three ABA responsive elements (ABREs). Through overexpressing pPSY2:GFP in Nicotiana tabacum we determined that all three ABREs are necessary for the ABA response. In the carrot transcriptome, we identified three ABRE binding protein (DcAREB) transcription factor candidates that localized in the nucleus, but only one, DcAREB3, was induced under ABA treatment in carrot roots. We found that AREB transcription factors bind to the carrot DcPSY2 promoter and transactivate the expression of reporter genes. We conclude that DcPSY2 is involved in ABA-mediated salt stress tolerance in carrot through the binding of AREB transcription factors to its promoter.

Indexed as

Salt StressAbscisic AcidDaucus carotaEnzyme InductionGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGeranylgeranyl-Diphosphate GeranylgeranyltransferaseAbscisic AcidGeranylgeranyl-Diphosphate Geranylgeranyltransferase

Identifiers

PMID29860511
PMCPMC6054239
OpenAlexW2805549763

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.