Evidence map›Paper›PMID 29860127›Full record

ArticleFree radical biology & medicine2018

ERCC1-deficient cells and mice are hypersensitive to lipid peroxidation.

Jolanta Czerwińska, Małgorzata Nowak, Patrycja Wojtczak, Dorota Dziuban-Lech, Jarosław M Cieśla, Daria Kołata, Beata Gajewska, Anna Barańczyk-Kuźma, Andria R Robinson, Hillary L Shane and 13 more

Abstract read
In one paragraph

Article in Free radical biology & medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 8 institutions in 2 countries.

Jolanta CzerwińskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland. Electronic address: jczerwinska@ibb.waw.pl.
Małgorzata NowakInstitute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland. Electronic address: malgorzata.nowak.eu@gmail.com.
Patrycja WojtczakInstitute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland. Electronic address: patrycja.m.wojtczak@gmail.com.
Dorota Dziuban-LechInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland. Electronic address: dziuban@ibb.waw.pl.
Jarosław M CieślaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland. Electronic address: castor@ibb.waw.pl.
Daria KołataInstitute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland. Electronic address: d.kolata@op.pl.
Beata GajewskaDepartment of Biochemistry, Medical University of Warsaw, Warsaw, Poland. Electronic address: bgajewska@wum.edu.pl.
Anna Barańczyk-KuźmaDepartment of Biochemistry, Medical University of Warsaw, Warsaw, Poland. Electronic address: akuzma@wum.edu.pl.
Andria R RobinsonDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA; University of Pittsburgh Medical Center Hillman Cancer Center, Pittsburgh, PA, USA. Electronic address: rasileae@yahoo.com.
Hillary L ShaneUniversity of Pittsburgh Medical Center Hillman Cancer Center, Pittsburgh, PA, USA. Electronic address: shaneh@pitt.edu.
Siobhán Q GreggUniversity of Pittsburgh Medical Center Hillman Cancer Center, Pittsburgh, PA, USA; Department of Cell Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA. Electronic address: siobhan.gregg@gmail.com.
Lora H RigattiUniversity of Pittsburgh Medical Center Hillman Cancer Center, Pittsburgh, PA, USA. Electronic address: rigattil@pitt.edu.
Matthew J YousefzadehDepartment of Molecular Medicine, Center on Aging, The Scripps Research Institute, Jupiter, FL, USA. Electronic address: myousefz@scripps.edu.
Aditi U GurkarDepartment of Molecular Medicine, Center on Aging, The Scripps Research Institute, Jupiter, FL, USA. Electronic address: agurkar1@pitt.edu.
Sara J McGowanDepartment of Molecular Medicine, Center on Aging, The Scripps Research Institute, Jupiter, FL, USA. Electronic address: smcgowan@scripps.edu.
Konrad KosickiInstitute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland. Electronic address: konrado@biol.uw.edu.pl.
Małgorzata BednarekInstitute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland. Electronic address: bednarekmj@gmail.com.
Ewelina ZarakowskaDepartment of Clinical Biochemistry, Faculty of Pharmacy, Collegium Medicum, Nicolaus Copernicus University in Toruń, Bydgoszcz, Poland. Electronic address: ewelinaz@cm.umk.pl.
Daniel GackowskiDepartment of Clinical Biochemistry, Faculty of Pharmacy, Collegium Medicum, Nicolaus Copernicus University in Toruń, Bydgoszcz, Poland. Electronic address: danielg@cm.umk.pl.
Ryszard OlińskiDepartment of Clinical Biochemistry, Faculty of Pharmacy, Collegium Medicum, Nicolaus Copernicus University in Toruń, Bydgoszcz, Poland. Electronic address: ryszardo@cm.umk.pl.
Elżbieta SpeinaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland. Electronic address: elasp@ibb.waw.pl.
Laura J NiedernhoferDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA; University of Pittsburgh Medical Center Hillman Cancer Center, Pittsburgh, PA, USA; Department of Molecular Medicine, Center on Aging, The Scripps Research Institute, Jupiter, FL, USA. Electronic address: lniedern@scripps.edu.
Barbara TudekInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland; Institute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw, Warsaw, Poland. Electronic address: tudek@ibb.waw.pl.
Institute of Biochemistry and Biophysics, Polish Academy of Sciences · PLScripps Research Institute · USWarsaw University of Technology · PLNicolaus Copernicus University · PLMedical University of Warsaw · PLUniversity of Pittsburgh · USUPMC Hillman Cancer Center · USUniversity of Warsaw · PL

Funding

PROTEOMICSP01AG043376 · NIA · UNIVERSITY OF MINNESOTA · PI ROBBINS, PAUL D. · 2013 to 2019
$11.2M
The contribution of DNA interstrand crosslinks to agingR01ES016114 · NIEHS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI NIEDERNHOFER, LAURA JANE · 2007 to 2011
$2.5M
Modulators of DNA damage associated nucleo-mitochondrial communication in agingR00AG049126 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GURKAR, ADITI U · 2017 to 2019
$835k
Aging Influence on the Development of Sleep ApneaK23AG024837 · NIA · BRIGHAM AND WOMEN'S HOSPITAL · PI MALHOTRA, ATUL · 2004 to 2007
$730k
Modulators of DNA damage associated nucleo-mitochondrial communication in agingK99AG049126 · NIA · SCRIPPS FLORIDA · PI GURKAR, ADITI U · 2015 to 2016
$203k
Dietary Cancer Prevention in DNA Repair Deficient MiceR03CA121411 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI NIEDERNHOFER, LAURA JANE · 2006 to 2007
$146k
NCI NIH HHS R03 CA121411NIA NIH HHS K23 AG024837NIA NIH HHS P01 AG043376NIA NIH HHS R00 AG049126NIEHS NIH HHS R01 ES016114
6 · The paper itself

Abstract

Lipid peroxidation (LPO) products are relatively stable and abundant metabolites, which accumulate in tissues of mammals with aging, being able to modify all cellular nucleophiles, creating protein and DNA adducts including crosslinks. Here, we used cells and mice deficient in the ERCC1-XPF endonuclease required for nucleotide excision repair and the repair of DNA interstrand crosslinks to ask if specifically LPO-induced DNA damage contributes to loss of cell and tissue homeostasis. Ercc1

Indexed as

Cellular SenescenceDNA DamageDNA RepairLipid PeroxidationOxidative StressAnimalsCell ProliferationDNA-Binding ProteinsEndonucleasesMiceMice, KnockoutReactive Oxygen SpeciesDNA-Binding ProteinsEndonucleasesErcc1 protein, mouseReactive Oxygen Species4-hydroxynonenalAgingDNA damageERCC1-XPFLipid peroxidationProgeriaSenescence

Identifiers

PMID29860127
PMCPMC6098728
OpenAlexW2806975889

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.