Evidence map›Paper›PMID 29859541›Full record

ArticleReproductive biology and endocrinology : RB&E2018

The thermo-sensitive gene expression signatures of spermatogenesis.

Santosh K Yadav, Aastha Pandey, Lokesh Kumar, Archana Devi, Bhavana Kushwaha, Rahul Vishvkarma, Jagdamba P Maikhuri, Singh Rajender, Gopal Gupta

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Reproductive biology and endocrinology : RB&E, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT07315737 (miRNAs Associated With Undescended and Retractile Testes), which is not on this map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT07315737 completednot on this mapstarted 2022, after this paper: background citation

miRNAs Associated With Undescended and Retractile Testes

TypeobservationalSponsorDr. Mevlüt KeleşRan2022 to 2023Enrolled28ConditionsMIRAS, Testicular Abnominalies, Undescended TestesArmsmiRNA
3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 72 citations in OpenAlex.

  1. Observational
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Heat stress and stallion fertility.Journal of animal science and technology · 2023
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Santosh K YadavDivision of Endocrinology, CSIR-Central Drug Research Institute, BS-10/1, Sector-10, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India.
Aastha PandeyDivision of Endocrinology, CSIR-Central Drug Research Institute, BS-10/1, Sector-10, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India.
Lokesh KumarDivision of Endocrinology, CSIR-Central Drug Research Institute, BS-10/1, Sector-10, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India.
Archana DeviDivision of Endocrinology, CSIR-Central Drug Research Institute, BS-10/1, Sector-10, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India.
Bhavana KushwahaDivision of Endocrinology, CSIR-Central Drug Research Institute, BS-10/1, Sector-10, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India.
Rahul VishvkarmaDivision of Endocrinology, CSIR-Central Drug Research Institute, BS-10/1, Sector-10, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India.
Jagdamba P MaikhuriDivision of Endocrinology, CSIR-Central Drug Research Institute, BS-10/1, Sector-10, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India.
Singh RajenderDivision of Endocrinology, CSIR-Central Drug Research Institute, BS-10/1, Sector-10, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India.
Gopal GuptaDivision of Endocrinology, CSIR-Central Drug Research Institute, BS-10/1, Sector-10, Jankipuram Extension, Sitapur Road, Lucknow, 226031, India. g_gupta@cdri.res.in.
Central Drug Research Institute · INAcademy of Scientific and Innovative Research · IN

Funding

Council of Scientific and Industrial Research BSC0101
6 · The paper itself

Abstract

backgroundSpermatogenesis in most mammals (including human and rat) occurs at ~ 3 °C lower than body temperature in a scrotum and fails rapidly at 37 °C inside the abdomen. The present study investigates the heat-sensitive transcriptome and miRNAs in the most vulnerable germ cells (spermatocytes and round spermatids) that are primarily targeted at elevated temperature in a bid to identify novel targets for contraception and/or infertility treatment.

methodsTestes of adult male rats subjected to surgical cryptorchidism were obtained at 0, 24, 72 and 120 h post-surgery, followed by isolation of primary spermatocytes and round spermatids and purification to > 90% purity using a combination of trypsin digestion, centrifugal elutriation and density gradient centrifugation techniques. RNA isolated from these cells was sequenced by massive parallel sequencing technique to identify the most-heat sensitive mRNAs and miRNAs.

resultsHeat stress altered the expression of a large number of genes by ≥2.0 fold, out of which 594 genes (286↑; 308↓) showed alterations in spermatocytes and 154 genes (105↑; 49↓) showed alterations in spermatids throughout the duration of experiment. 62 heat-sensitive genes were common to both cell types. Similarly, 66 and 60 heat-sensitive miRNAs in spermatocytes and spermatids, respectively, were affected by ≥1.5 fold, out of which 6 were common to both the cell types.

conclusionThe study has identified Acly, selV, SLC16A7(MCT-2), Txnrd1 and Prkar2B as potential heat sensitive targets in germ cells, which may be tightly regulated by heat sensitive miRNAs rno-miR-22-3P, rno-miR-22-5P, rno-miR-129-5P, rno-miR-3560, rno-miR-3560 and rno-miR-466c-5P.

Indexed as

Hot TemperatureAnimalsGene ExpressionGene Expression ProfilingMaleRatsRats, Sprague-DawleySpermatocytesSpermatogenesis

Identifiers

PMID29859541
PMCPMC5985054
OpenAlexW2807152668

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.