Evidence map›Paper›PMID 29857068›Full record

ArticleThe Journal of investigative dermatology2018

Genomic Analyses Identify Recurrent Alterations in Immune Evasion Genes in Diffuse Large B-Cell Lymphoma, Leg Type.

Xiaolong Alan Zhou, Abner Louissaint, Alexander Wenzel, Jingyi Yang, Maria Estela Martinez-Escala, Andrea P Moy, Elizabeth A Morgan, Christian N Paxton, Bo Hong, Erica F Andersen and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of investigative dermatology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. RHOA controls oncogenic B cell receptor signaling in aggressive lymphoma.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. Review
  5. A rare case of CD20JAAD case reports · 2024
    Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Cutaneous Lymphoma and Antibody-Directed Therapies.Antibodies (Basel, Switzerland) · 2023
    Review
  11. Review
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Molecular Pathogenesis ofFrontiers in oncology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 2 countries.

Xiaolong Alan ZhouDepartment of Dermatology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Abner LouissaintDepartment of Pathology, Massachusetts General Hospital, Boston, Massachusetts, USA; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
Alexander WenzelDepartment of Biochemistry and Molecular Genetics, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Jingyi YangDepartment of Biochemistry and Molecular Genetics, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA; Robert H. Lurie Comprehensive Cancer Center of Northwestern University, Chicago, Illinois, USA.
Maria Estela Martinez-EscalaDepartment of Dermatology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Andrea P MoyDepartment of Pathology, Massachusetts General Hospital, Boston, Massachusetts, USA; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.
Elizabeth A MorganDepartment of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts.
Christian N PaxtonARUP Institute for Clinical and Experimental Pathology, Salt Lake City, Utah, USA.
Bo HongDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, Utah, USA.
Erica F AndersenDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, Utah, USA.
Joan GuitartDepartment of Dermatology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Amir BehdadDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Lorenzo CerroniDepartment of Dermatology, Medical University of Graz, Graz, Austria.
David M WeinstockDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA; Broad Institute of Harvard and Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.
Jaehyuk ChoiDepartment of Dermatology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA; Department of Biochemistry and Molecular Genetics, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA; Robert H. Lurie Comprehensive Cancer Center of Northwestern University, Chicago, Illinois, USA. Electronic address: jaehyuk.choi@northwestern.edu.
Northwestern University · USDana-Farber Cancer Institute · USUniversity of Utah · USARUP Laboratories (United States) · USBrigham and Women's Hospital · USMassachusetts Institute of Technology · USMedical University of Graz · AT

Funding

Northwestern University Clinical and Translational Science Institute (NUCATS)UL1TR001422 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI D'AQUILA, RICHARD · 2015 to 2023
$56.8M
San Diego Biomedical Informatics Education & Research (SABER)T15LM011271 · NLM · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SHAMIM NEMATI · 2012 to 2026
$9.7M
Post Graduate Program in Cutaneous BiologyT32AR060710 · NIAMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Amy S Paller · 2012 to 2026
$2.4M
The Role of ZEB1 Mutations in Cutaneous T Cell LymphomaK08CA191019 · NCI · YALE UNIVERSITY · PI CHOI, JAEHYUK · 2015 to 2019
$760k
Molecular determinants of prognosis in limited-stage follicular lymphomaK23CA184279 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI LOUISSAINT, ABNER · 2014 to 2018
$701k
NCATS NIH HHS UL1 TR001422NCI NIH HHS K08 CA191019NCI NIH HHS K23 CA184279NIAMS NIH HHS T32 AR060710NLM NIH HHS T15 LM011271
6 · The paper itself

Abstract

Cutaneous diffuse large B-cell lymphomas (DLBCLs) are aggressive lymphomas with a poor prognosis. To elucidate their genetic bases, we analyzed exome sequencing of 37 cutaneous DLBCLs, including 31 DLBCLs, leg type (DLBCL-LT) and 6 cutaneous DLBCLs-not otherwise specified (DLBCL-NOS). As reported previously, 77% of DLBCL-LT harbor NF-κB-activating MYD88 mutations. In nearly all MYD88-wild-type DLBCL-LT, we found cancer-promoting mutations that either activate the NF-κB pathway through alternative genes (NFKBIE or REL) or activate other canonical cancer pathways (BRAF, MED12, PIK3R1, and STAT3). After NF-κB, the second most commonly mutated pathway putatively enables immune evasion via mutations predicted to downregulate antigen processing (B2M, CIITA, HLA) or T-cell co-stimulation (CD58). DLBCL-LT have little genetic overlap with the genetically heterogeneous DLBCL-NOS. Instead, they resemble primary central nervous system and testicular large B-cell lymphomas (primary central nervous system lymphomas and primary testicular lymphomas). Like primary central nervous system lymphomas/primary testicular lymphomas, 40% of DLBCL-LT (vs. 0% of DLBCLs-not otherwise specified) harbored PDL1/PDL2 translocations, which lead to overexpression of PD-L1 or PD-L2 in 50% of the cases. Collectively, these data broaden our understanding of cutaneous DLBCLs and suggest novel therapeutic approaches (e.g., BRAF or PI3K inhibitors). Additionally, they suggest novel treatment paradigms, wherein DLBCL-LT can be targeted with strategies (e.g., immune checkpoint blockers) currently being developed for genomically similar primary central nervous system lymphomas/primary testicular lymphomas.

Indexed as

AgedAged, 80 and overAntigen PresentationB7-H1 AntigenExome SequencingFemaleHumansImmune EvasionLegLymphocyte ActivationLymphoma, Large B-Cell, DiffuseMaleMiddle AgedMutationMyeloid Differentiation Factor 88NF-kappa BB7-H1 AntigenCD274 protein, humanMyeloid Differentiation Factor 88NF-kappa BPDCD1LG2 protein, humanProgrammed Cell Death 1 Ligand 2 Protein

Identifiers

PMID29857068
PMCPMC6200585
OpenAlexW2806814319

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.