Evidence map›Paper›PMID 29856852›Full record

ArticlePloS one2018

Assessing the inter-observer variability of Computer-Aided Nodule Assessment and Risk Yield (CANARY) to characterize lung adenocarcinomas.

Erica C Nakajima, Michael P Frankland, Tucker F Johnson, Sanja L Antic, Heidi Chen, Sheau-Chiann Chen, Ronald A Karwoski, Ronald Walker, Bennett A Landman, Ryan D Clay and 5 more

Abstract readComparative Study
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. The impact of the lung EDRN-CVC on Phase 1, 2, & 3 biomarker validation studies.Cancer biomarkers : section A of Disease markers · 2022
    Article
  6. Validation of the BRODERS classifier (BenignThe European respiratory journal · 2021
    Article
  7. Article
  8. Lung Cancer Detection using Co-learning from Chest CT Images and Clinical Demographics.Proceedings of SPIE--the International Society for Optical Engineering · 2019
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Erica C NakajimaDepartment of Internal Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.ORCID 0000-0001-7574-7297
Michael P FranklandVanderbilt University, Nashville, Tennessee, United States of America.
Tucker F JohnsonDepartment of Radiology, Mayo Clinic, Rochester, Minnesota, United States of America.
Sanja L AnticDepartment of Internal Medicine, Division of Allergy, Pulmonary and Critical Care, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Heidi ChenCenter for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Sheau-Chiann ChenCenter for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Ronald A KarwoskiDepartment of Physiology and Biomedical Engineering, Mayo Clinic, Rochester, Minnesota, United States of America.
Ronald WalkerVeterans Affairs Tennessee Valley Health Care System, Nashville, Tennessee, United States of America.
Bennett A LandmanDepartment of Electrical Engineering, Vanderbilt University, Nashville, Tennessee, United States of America.
Ryan D ClayDepartment of Radiology, Mayo Clinic, Rochester, Minnesota, United States of America.
Brian J BartholmaiDepartment of Radiology, Mayo Clinic, Rochester, Minnesota, United States of America.
Srinivasan RajagopalanDepartment of Physiology and Biomedical Engineering, Mayo Clinic, Rochester, Minnesota, United States of America.
Tobias PeikertDivision of Pulmonary and Critical Care Medicine, Mayo Clinic, Rochester, Minnesota, United States of America.
Pierre P MassionDepartment of Internal Medicine, Division of Allergy, Pulmonary and Critical Care, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.
Fabien MaldonadoDepartment of Internal Medicine, Division of Allergy, Pulmonary and Critical Care, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America.

Funding

Validation of Biomarkers of Risk for the Early Detection of Lung CancerU01CA152662 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI DEPPEN, STEPHEN, GROGAN, ERIC L · 2010 to 2025
$12.8M
Cellular, molecular and quantitative imaging analysis of screening-detected lung adenocarcinomaU01CA196405 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MALDONADO, FABIEN · 2015 to 2020
$5.4M
Non-invasive evaluation of indeterminate pulmonary nodulesU01CA186145 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MASSION, PIERRE P. · 2015 to 2019
$2.0M
NCI NIH HHS U01 CA152662NCI NIH HHS U01 CA186145NCI NIH HHS U01 CA196405
6 · The paper itself

Abstract

Lung adenocarcinoma (ADC), the most common lung cancer type, is recognized increasingly as a disease spectrum. To guide individualized patient care, a non-invasive means of distinguishing indolent from aggressive ADC subtypes is needed urgently. Computer-Aided Nodule Assessment and Risk Yield (CANARY) is a novel computed tomography (CT) tool that characterizes early ADCs by detecting nine distinct CT voxel classes, representing a spectrum of lepidic to invasive growth, within an ADC. CANARY characterization has been shown to correlate with ADC histology and patient outcomes. This study evaluated the inter-observer variability of CANARY analysis. Three novice observers segmented and analyzed independently 95 biopsy-confirmed lung ADCs from Vanderbilt University Medical Center/Nashville Veterans Administration Tennessee Valley Healthcare system (VUMC/TVHS) and the Mayo Clinic (Mayo). Inter-observer variability was measured using intra-class correlation coefficient (ICC). The average ICC for all CANARY classes was 0.828 (95% CI 0.76, 0.895) for the VUMC/TVHS cohort, and 0.852 (95% CI 0.804, 0.901) for the Mayo cohort. The most invasive voxel classes had the highest ICC values. To determine whether nodule size influenced inter-observer variability, an additional cohort of 49 sub-centimeter nodules from Mayo were also segmented by three observers, with similar ICC results. Our study demonstrates that CANARY ADC classification between novice CANARY users has an acceptably low degree of variability, and supports the further development of CANARY for clinical application.

Indexed as

Diagnosis, Computer-AssistedImage Processing, Computer-AssistedObserver VariationTomography, X-Ray ComputedAdenocarcinoma of LungAgedAlgorithmsFemaleHumansLung NeoplasmsMaleMiddle AgedNeoplasm InvasivenessRisk AssessmentSolitary Pulmonary Nodule

Identifiers

PMID29856852
PMCPMC5983856

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.