Evidence map›Paper›PMID 29856759›Full record

ArticlePloS one2018

Small molecule inhibitors and CRISPR/Cas9 mutagenesis demonstrate that SMYD2 and SMYD3 activity are dispensable for autonomous cancer cell proliferation.

Michael J Thomenius, Jennifer Totman, Darren Harvey, Lorna H Mitchell, Thomas V Riera, Kat Cosmopoulos, Alexandra R Grassian, Christine Klaus, Megan Foley, Elizabeth A Admirand and 24 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  13. Identifying novel SMYD3 interactors on the trail of cancer hallmarks.Computational and structural biotechnology journal · 2022
    Article
  14. Review
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  17. Article
  18. Discovery of an Allosteric Ligand Binding Site in SMYD3 Lysine Methyltransferase.Chembiochem : a European journal of chemical biology · 2021
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 1 institution in 1 country.

Michael J ThomeniusEpizyme, Inc., Cambridge, Massachusetts, United States of America.ORCID 0000-0002-3357-7872
Jennifer TotmanEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Darren HarveyEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Lorna H MitchellEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Thomas V RieraEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Kat CosmopoulosEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Alexandra R GrassianEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Christine KlausEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Megan FoleyEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Elizabeth A AdmirandEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Haris JahicEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Christina MajerEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Tim WigleEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Suzanne L JacquesEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Jodi GureaskoEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Dorothy BrachEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Trupti LingarajEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Kip WestEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Sherri SmithEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Nathalie RiouxEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Nigel J WatersEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Cuyue TangEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Alejandra RaimondiEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Michael MunchhofEpizyme, Inc., Cambridge, Massachusetts, United States of America.
James E MillsEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Scott RibichEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Margaret Porter ScottEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Kevin W KuntzEpizyme, Inc., Cambridge, Massachusetts, United States of America.
William P JanzenEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Mikel MoyerEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Jesse J SmithEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Richard ChesworthEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Robert A CopelandEpizyme, Inc., Cambridge, Massachusetts, United States of America.
P Ann Boriack-SjodinEpizyme, Inc., Cambridge, Massachusetts, United States of America.
Epizyme (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A key challenge in the development of precision medicine is defining the phenotypic consequences of pharmacological modulation of specific target macromolecules. To address this issue, a variety of genetic, molecular and chemical tools can be used. All of these approaches can produce misleading results if the specificity of the tools is not well understood and the proper controls are not performed. In this paper we illustrate these general themes by providing detailed studies of small molecule inhibitors of the enzymatic activity of two members of the SMYD branch of the protein lysine methyltransferases, SMYD2 and SMYD3. We show that tool compounds as well as CRISPR/Cas9 fail to reproduce many of the cell proliferation findings associated with SMYD2 and SMYD3 inhibition previously obtained with RNAi based approaches and with early stage chemical probes.

Indexed as

A549 CellsAdenocarcinoma of LungCarcinogenesisCell ProliferationCRISPR-Cas SystemsEnzyme InhibitorsHistone-Lysine N-MethyltransferaseHumansMethylationMethyltransferasesRNA InterferenceSmall Molecule LibrariesEnzyme InhibitorsHistone-Lysine N-MethyltransferaseMethyltransferasesSmall Molecule LibrariesSMYD2 protein, humanSMYD3 protein, human

Identifiers

PMID29856759
PMCPMC5983452
OpenAlexW2807549853

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.