Evidence map›Paper›PMID 29855747›Full record

ArticleJournal of plant research2018

Comparative proteomic analysis reveals the roots response to low root-zone temperature in Malus baccata.

Li-Jie Li, Xiao-Chen Lu, Huai-Yu Ma, De-Guo Lyu

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Journal of plant research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 20 citations in OpenAlex.

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  7. 24-Epibrassinolide promotes NOBMC plant biology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Li-Jie LiCollege of Horticulture, Shenyang Agricultural University, Shenyang, 110866, China.
Xiao-Chen LuCollege of Horticulture, Shenyang Agricultural University, Shenyang, 110866, China.
Huai-Yu MaCollege of Horticulture, Shenyang Agricultural University, Shenyang, 110866, China. mhyblackcurrent@163.com.
De-Guo LyuCollege of Horticulture, Shenyang Agricultural University, Shenyang, 110866, China. gszp2017@163.com.
Shenyang Agricultural University · CN

Funding

China Agriculture Research System No. CARS-28Research and Demonstration of the Main Natural Disasters Prevention of Friuts Trees No. 2014BAD16B0703the Institutions of Higher Learning Fruit Tree Cultivation and Physio-Ecology Innovation Team of Liaoning Province No. LT2014014the Nation Natural Science Foundation of China No. 31000887the Science and Technology Research Projects for Apple of Liaoning Province No. 2014204004
6 · The paper itself

Abstract

Soil temperature is known to affect plant growth and productivity. In this study we found that low root-zone temperature (LRT) inhibited the growth of apple (Malus baccata Borkh.) seedlings. To elucidate the molecular mechanism of LRT response, we performed comparative proteome analysis of the apple roots under LRT for 6 days. Total proteins of roots were extracted and separated by two-dimensional gel electrophoresis (2-DE) and 29 differentially accumulated proteins were successfully identified by MALDI-TOF/TOF mass spectrometry. They were involved in protein transport/processing/degradation (21%), glycometabolism (20%), response to stress (14%), oxidoreductase activity (14%), protein binding (7%), RNA metabolism (7%), amino acid biosynthesis (3%) and others (14%). The results revealed that LRT inhibited glycometabolism and RNA metabolism. The up-regulated proteins which were associated with oxidoreductase activity, protein metabolism and defense response, might be involved in protection mechanisms against LRT stress in the apple seedlings. Subsequently, 8 proteins were selected for the mRNA quantification analysis, and we found 6 of them were consistently regulated between protein and mRNA levels. In addition, the enzyme activities in ascorbate-glutathione (AsA-GSH) cycle were determined, and APX activity was increased and GR activity was decreased under LRT, in consistent with the protein levels. This study provides new insights into the molecular mechanisms of M. baccata in responding to LRT.

Indexed as

ProteomeCold TemperatureElectrophoresis, Gel, Two-DimensionalMalusPlant RootsProteomicsSeedlingsProteome2-DEAsA–GSH cycleLow root-zone temperatureMalus baccata Borkh.

Identifiers

PMID29855747
OpenAlexW2807482909

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.